Basic Installation Tutorial
This tutorial will guide you through the process of installing
software using Spack. We will first cover the spack install command,
focusing on the power of the spec syntax and the flexibility it gives
to users. We will also cover the spack find command for viewing
installed packages and the spack uninstall command for uninstalling
them. Finally, we will touch on how Spack manages compilers,
especially as it relates to using Spack-built compilers within Spack.
We will include full output from all of the commands demonstrated,
although we will frequently call attention to only small portions of
that output (or merely to the fact that it succeeded). The provided
output is all from an Ubuntu 22.04 Docker image.
Installing Spack
Spack works out of the box. Simply clone Spack to get going. We will clone Spack and immediately check out the most recent release, v0.21.
$ git clone --depth=100 --branch=releases/v0.21 https://github.com/spack/spack.git ~/spack
Cloning into '/home/spack/spack'...
remote: Enumerating objects: 20108, done.K
remote: Counting objects: 100% (20108/20108), done.K
remote: Compressing objects: 100% (11087/11087), done.K
remote:nTotale20108 (delta92238),1reused.13668B(delta81653),spack-reused 0K
Receiving objects: 100% (20108/20108), 13.37MMiB||120.02MMiB/s, done.
Resolving deltas: 100% (2238/2238), done.
Updating files: 100% (10999/10999), done.
$ cd ~/spack
Next, add Spack to your path. Spack has some nice command-line
integration tools, so instead of simply prepending to your PATH
variable, source the Spack setup script.
$ . share/spack/setup-env.sh
You’re good to go!
What is in Spack?
The spack list command shows available packages.
$ spack list
3dtk py-googleapis-common-protos
3proxy py-googledrivedownloader
7zip py-gosam
abacus py-gpaw
abduco py-gpustat
The spack list command can also take a query string. Spack
automatically adds wildcards to both ends of the string, or you
can add your own wildcards. For example, we can view all available
Python packages.
$ spack list 'py-*'
py-3to2 py-msal
py-4suite-xml py-msal-extensions
py-a2wsgi py-msgpack
py-abcpy py-msgpack-numpy
py-abipy py-msrest
Installing Packages
Installing a package with Spack is very simple. To install a piece of
software, simply type spack install <package_name>.
$ spack install gmake
==> Installing gmake-4.4.1-znvoaniggvauzxv4yobchqt4g7tyjuc7 [1/1]
==> No binary for gmake-4.4.1-znvoaniggvauzxv4yobchqt4g7tyjuc7 found: installing from source
==> Fetching https://mirror.spack.io/_source-cache/archive/dd/dd16fb1d67bfab79a72f5e8390735c49e3e8e70b4945a15ab1f81ddb78658fb3.tar.gz
==> No patches needed for gmake
==> gmake: Executing phase: 'install'
==> gmake: Successfully installed gmake-4.4.1-znvoaniggvauzxv4yobchqt4g7tyjuc7
Stage: 0.19s. Install: 12.22s. Post-install: 0.02s. Total: 12.46s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/gmake-4.4.1-znvoaniggvauzxv4yobchqt4g7tyjuc7
Spack can install software either from source or from a binary cache. Packages in the binary cache are signed with GPG for security. For the tutorial we have prepared a binary cache so you don’t have to wait on slow compilation from source. To be able to install from the binary cache, we will need to configure Spack with the location of the binary cache and trust the GPG key that the binary cache was signed with.
$ spack mirror add tutorial /mirror
$ spack buildcache keys --install --trust
==> Fetching file:///mirror/build_cache/_pgp/spack-public-binary-key.pub
gpg: key A8E0CA3C1C2ADA2F: 7 signatures not checked due to missing keys
gpg: key A8E0CA3C1C2ADA2F: public key "Spack Project Official Binaries <maintainers@spack.io>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: no ultimately trusted keys found
gpg: inserting ownertrust of 6
You’ll learn more about configuring Spack later in the tutorial, but
for now you will be able to install the rest of the packages in the
tutorial from a binary cache using the same spack install
command. By default this will install the binary cached version if it
exists and fall back on installing from source if it does not.
Spack’s spec syntax is the interface by which we can request specific
configurations of the package. The % sigil is used to specify
compilers.
$ spack install zlib-ng %clang
==> Installing gmake-4.4.1-d54pflh3qlovydzjgff55nvzxtqedobt [1/2]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-clang-14.0.0-gmake-4.4.1-d54pflh3qlovydzjgff55nvzxtqedobt.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/clang-14.0.0/gmake-4.4.1/linux-ubuntu22.04-x86_64_v3-clang-14.0.0-gmake-4.4.1-d54pflh3qlovydzjgff55nvzxtqedobt.spack
==> Extracting gmake-4.4.1-d54pflh3qlovydzjgff55nvzxtqedobt from binary cache
==> gmake: Successfully installed gmake-4.4.1-d54pflh3qlovydzjgff55nvzxtqedobt
Search: 0.00s. Fetch: 0.09s. Install: 0.05s. Extract: 0.03s. Relocate: 0.01s. Total: 0.13s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/clang-14.0.0/gmake-4.4.1-d54pflh3qlovydzjgff55nvzxtqedobt
==> Installing zlib-ng-2.1.4-hywknaoywohnvaldqch2ly74svzezfrw [2/2]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-clang-14.0.0-zlib-ng-2.1.4-hywknaoywohnvaldqch2ly74svzezfrw.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/clang-14.0.0/zlib-ng-2.1.4/linux-ubuntu22.04-x86_64_v3-clang-14.0.0-zlib-ng-2.1.4-hywknaoywohnvaldqch2ly74svzezfrw.spack
==> Extracting zlib-ng-2.1.4-hywknaoywohnvaldqch2ly74svzezfrw from binary cache
==> zlib-ng: Successfully installed zlib-ng-2.1.4-hywknaoywohnvaldqch2ly74svzezfrw
Search: 0.00s. Fetch: 0.01s. Install: 0.02s. Extract: 0.01s. Relocate: 0.01s. Total: 0.03s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/clang-14.0.0/zlib-ng-2.1.4-hywknaoywohnvaldqch2ly74svzezfrw
Note that this installation is located separately from the previous one. We will discuss this in more detail later, but this is part of what allows Spack to support arbitrarily versioned software.
You can check for particular versions before requesting them. We will
use the spack versions command to see the available versions, and then
install a different version of zlib-ng.
$ spack versions zlib-ng
==> Safe versions (already checksummed):
2.1.4 2.1.3 2.1.2 2.0.7 2.0.0
==> Remote versions (not yet checksummed):
2.1.1-beta2 2.1.0-beta1 2.0.6 2.0.5 2.0.4 2.0.3
The @ sigil is used to specify versions, both of packages and of
compilers.
$ spack install zlib-ng@2.0.7
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/gmake-4.4.1-znvoaniggvauzxv4yobchqt4g7tyjuc7
==> Installing zlib-ng-2.0.7-ffnsgi66pitfl3r6drsojucl66osakje [2/2]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-zlib-ng-2.0.7-ffnsgi66pitfl3r6drsojucl66osakje.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/zlib-ng-2.0.7/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-zlib-ng-2.0.7-ffnsgi66pitfl3r6drsojucl66osakje.spack
==> Extracting zlib-ng-2.0.7-ffnsgi66pitfl3r6drsojucl66osakje from binary cache
==> zlib-ng: Successfully installed zlib-ng-2.0.7-ffnsgi66pitfl3r6drsojucl66osakje
Search: 0.00s. Fetch: 0.10s. Install: 0.05s. Extract: 0.04s. Relocate: 0.01s. Total: 0.15s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/zlib-ng-2.0.7-ffnsgi66pitfl3r6drsojucl66osakje
$ spack install zlib-ng %gcc@10
==> Installing gmake-4.4.1-gexmwfhpiumjrmlkqrsusomjc5cpa2ka [1/2]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-10.5.0-gmake-4.4.1-gexmwfhpiumjrmlkqrsusomjc5cpa2ka.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-10.5.0/gmake-4.4.1/linux-ubuntu22.04-x86_64_v3-gcc-10.5.0-gmake-4.4.1-gexmwfhpiumjrmlkqrsusomjc5cpa2ka.spack
==> Extracting gmake-4.4.1-gexmwfhpiumjrmlkqrsusomjc5cpa2ka from binary cache
==> gmake: Successfully installed gmake-4.4.1-gexmwfhpiumjrmlkqrsusomjc5cpa2ka
Search: 0.00s. Fetch: 0.10s. Install: 0.06s. Extract: 0.05s. Relocate: 0.01s. Total: 0.16s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-10.5.0/gmake-4.4.1-gexmwfhpiumjrmlkqrsusomjc5cpa2ka
==> Installing zlib-ng-2.1.4-tm2or5eemtuselxphhipremogmszohrv [2/2]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-10.5.0-zlib-ng-2.1.4-tm2or5eemtuselxphhipremogmszohrv.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-10.5.0/zlib-ng-2.1.4/linux-ubuntu22.04-x86_64_v3-gcc-10.5.0-zlib-ng-2.1.4-tm2or5eemtuselxphhipremogmszohrv.spack
==> Extracting zlib-ng-2.1.4-tm2or5eemtuselxphhipremogmszohrv from binary cache
==> zlib-ng: Successfully installed zlib-ng-2.1.4-tm2or5eemtuselxphhipremogmszohrv
Search: 0.00s. Fetch: 0.01s. Install: 0.03s. Extract: 0.02s. Relocate: 0.01s. Total: 0.05s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-10.5.0/zlib-ng-2.1.4-tm2or5eemtuselxphhipremogmszohrv
The spec syntax also includes compiler flags. Spack accepts
cppflags, cflags, cxxflags, fflags, ldflags, and
ldlibs parameters. The values of these fields must be quoted on
the command line if they include spaces. These values are injected
into the compile line automatically by the Spack compiler wrappers.
$ spack install zlib-ng@2.0.7 cflags=-O3
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/gmake-4.4.1-znvoaniggvauzxv4yobchqt4g7tyjuc7
==> Installing zlib-ng-2.0.7-npuw4upl6iiyuihnlv4qxnw4fjatcg4h [2/2]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-zlib-ng-2.0.7-npuw4upl6iiyuihnlv4qxnw4fjatcg4h.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/zlib-ng-2.0.7/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-zlib-ng-2.0.7-npuw4upl6iiyuihnlv4qxnw4fjatcg4h.spack
==> Extracting zlib-ng-2.0.7-npuw4upl6iiyuihnlv4qxnw4fjatcg4h from binary cache
==> zlib-ng: Successfully installed zlib-ng-2.0.7-npuw4upl6iiyuihnlv4qxnw4fjatcg4h
Search: 0.00s. Fetch: 0.10s. Install: 0.05s. Extract: 0.04s. Relocate: 0.01s. Total: 0.15s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/zlib-ng-2.0.7-npuw4upl6iiyuihnlv4qxnw4fjatcg4h
The spack find command is used to query installed packages. Note that
some packages appear identical with the default output. The -l flag
shows the hash of each package, and the -f flag shows any non-empty
compiler flags of those packages.
$ spack find
-- linux-ubuntu22.04-x86_64_v3 / clang@14.0.0 -------------------
gmake@4.4.1 zlib-ng@2.1.4
-- linux-ubuntu22.04-x86_64_v3 / gcc@10.5.0 ---------------------
gmake@4.4.1 zlib-ng@2.1.4
-- linux-ubuntu22.04-x86_64_v3 / gcc@11.4.0 ---------------------
gmake@4.4.1 zlib-ng@2.0.7 zlib-ng@2.0.7
==> 7 installed packages
$ spack find -lf
-- linux-ubuntu22.04-x86_64_v3 / clang@14.0.0 -------------------
d54pflh gmake@4.4.1%clang hywknao zlib-ng@2.1.4%clang
-- linux-ubuntu22.04-x86_64_v3 / gcc@10.5.0 ---------------------
gexmwfh gmake@4.4.1%gcc tm2or5e zlib-ng@2.1.4%gcc
-- linux-ubuntu22.04-x86_64_v3 / gcc@11.4.0 ---------------------
znvoani gmake@4.4.1%gcc npuw4up zlib-ng@2.0.7%gcc cflags="-O3"
ffnsgi6 zlib-ng@2.0.7%gcc
==> 7 installed packages
Spack generates a hash for each spec. This hash is a function of the full provenance of the package, so any change to the spec affects the hash. Spack uses this value to compare specs and to generate unique installation directories for every combinatorial version. As we move into more complicated packages with software dependencies, we can see that Spack reuses existing packages to satisfy a dependency. By default, Spack tries hard to reuse existing installations as dependencies, either from a local store or from configured remote buildcaches. This minimizes unwanted rebuilds of common dependencies, in particular if you update Spack frequently.
$ spack install tcl
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/gmake-4.4.1-znvoaniggvauzxv4yobchqt4g7tyjuc7
==> Installing zlib-ng-2.1.4-5xcetrvs3fzd7k27dw5duyxitnsy4uvh [2/3]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-zlib-ng-2.1.4-5xcetrvs3fzd7k27dw5duyxitnsy4uvh.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/zlib-ng-2.1.4/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-zlib-ng-2.1.4-5xcetrvs3fzd7k27dw5duyxitnsy4uvh.spack
==> Extracting zlib-ng-2.1.4-5xcetrvs3fzd7k27dw5duyxitnsy4uvh from binary cache
==> zlib-ng: Successfully installed zlib-ng-2.1.4-5xcetrvs3fzd7k27dw5duyxitnsy4uvh
Search: 0.00s. Fetch: 0.13s. Install: 0.06s. Extract: 0.05s. Relocate: 0.01s. Total: 0.19s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/zlib-ng-2.1.4-5xcetrvs3fzd7k27dw5duyxitnsy4uvh
==> Installing tcl-8.6.12-tt2hv6rwgikh7fzzrbkveukdhs2jmioe [3/3]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-tcl-8.6.12-tt2hv6rwgikh7fzzrbkveukdhs2jmioe.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/tcl-8.6.12/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-tcl-8.6.12-tt2hv6rwgikh7fzzrbkveukdhs2jmioe.spack
==> Extracting tcl-8.6.12-tt2hv6rwgikh7fzzrbkveukdhs2jmioe from binary cache
==> tcl: Successfully installed tcl-8.6.12-tt2hv6rwgikh7fzzrbkveukdhs2jmioe
Search: 0.00s. Fetch: 0.04s. Install: 1.27s. Extract: 1.18s. Relocate: 0.08s. Total: 1.31s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/tcl-8.6.12-tt2hv6rwgikh7fzzrbkveukdhs2jmioe
Dependencies can be explicitly requested using the ^ sigil. Note that
the spec syntax is recursive. Anything we could specify about the
top-level package, we can also specify about a dependency using ^.
$ spack install tcl ^zlib-ng@2.0.7 %clang
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/clang-14.0.0/gmake-4.4.1-d54pflh3qlovydzjgff55nvzxtqedobt
==> Installing zlib-ng-2.0.7-amkpmimysfvkkswe3sxbfr7hbvevvulz [2/3]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-clang-14.0.0-zlib-ng-2.0.7-amkpmimysfvkkswe3sxbfr7hbvevvulz.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/clang-14.0.0/zlib-ng-2.0.7/linux-ubuntu22.04-x86_64_v3-clang-14.0.0-zlib-ng-2.0.7-amkpmimysfvkkswe3sxbfr7hbvevvulz.spack
==> Extracting zlib-ng-2.0.7-amkpmimysfvkkswe3sxbfr7hbvevvulz from binary cache
==> zlib-ng: Successfully installed zlib-ng-2.0.7-amkpmimysfvkkswe3sxbfr7hbvevvulz
Search: 0.00s. Fetch: 0.09s. Install: 0.05s. Extract: 0.03s. Relocate: 0.01s. Total: 0.14s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/clang-14.0.0/zlib-ng-2.0.7-amkpmimysfvkkswe3sxbfr7hbvevvulz
==> Installing tcl-8.6.12-keocaqa7rfdjqv3j3ipbe42jwnpbepjy [3/3]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-clang-14.0.0-tcl-8.6.12-keocaqa7rfdjqv3j3ipbe42jwnpbepjy.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/clang-14.0.0/tcl-8.6.12/linux-ubuntu22.04-x86_64_v3-clang-14.0.0-tcl-8.6.12-keocaqa7rfdjqv3j3ipbe42jwnpbepjy.spack
==> Extracting tcl-8.6.12-keocaqa7rfdjqv3j3ipbe42jwnpbepjy from binary cache
==> tcl: Successfully installed tcl-8.6.12-keocaqa7rfdjqv3j3ipbe42jwnpbepjy
Search: 0.00s. Fetch: 0.03s. Install: 1.07s. Extract: 1.00s. Relocate: 0.06s. Total: 1.10s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/clang-14.0.0/tcl-8.6.12-keocaqa7rfdjqv3j3ipbe42jwnpbepjy
Packages can also be referred to from the command line by their package
hash. Using the spack find -lf command earlier we saw that the hash
of our optimized installation of zlib-ng (cflags="-O3") began with
npuw4up. We can now explicitly build with that package without typing
the entire spec, by using the / sigil to refer to it by hash. As with
other tools like Git, you do not need to specify an entire hash on the
command line. You can specify just enough digits to identify a hash
uniquely. If a hash prefix is ambiguous (i.e., two or more installed
packages share the prefix) then Spack will report an error.
$ spack install tcl ^/npu
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/gmake-4.4.1-znvoaniggvauzxv4yobchqt4g7tyjuc7
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/zlib-ng-2.0.7-npuw4upl6iiyuihnlv4qxnw4fjatcg4h
==> Installing tcl-8.6.12-qfb3pvmra4r2pbhuklpbtk77wdwzfpxj [3/3]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-tcl-8.6.12-qfb3pvmra4r2pbhuklpbtk77wdwzfpxj.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/tcl-8.6.12/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-tcl-8.6.12-qfb3pvmra4r2pbhuklpbtk77wdwzfpxj.spack
==> Extracting tcl-8.6.12-qfb3pvmra4r2pbhuklpbtk77wdwzfpxj from binary cache
==> tcl: Successfully installed tcl-8.6.12-qfb3pvmra4r2pbhuklpbtk77wdwzfpxj
Search: 0.00s. Fetch: 0.12s. Install: 1.11s. Extract: 1.04s. Relocate: 0.06s. Total: 1.23s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/tcl-8.6.12-qfb3pvmra4r2pbhuklpbtk77wdwzfpxj
The spack find command can also take a -d flag, which can show
dependency information. Note that each package has a top-level entry,
even if it also appears as a dependency.
$ spack find -ldf
-- linux-ubuntu22.04-x86_64_v3 / clang@14.0.0 -------------------
d54pflh gmake@4.4.1%clang
keocaqa tcl@8.6.12%clang
d54pflh gmake@4.4.1%clang
amkpmim zlib-ng@2.0.7%clang
amkpmim zlib-ng@2.0.7%clang
d54pflh gmake@4.4.1%clang
hywknao zlib-ng@2.1.4%clang
d54pflh gmake@4.4.1%clang
-- linux-ubuntu22.04-x86_64_v3 / gcc@10.5.0 ---------------------
gexmwfh gmake@4.4.1%gcc
tm2or5e zlib-ng@2.1.4%gcc
gexmwfh gmake@4.4.1%gcc
-- linux-ubuntu22.04-x86_64_v3 / gcc@11.4.0 ---------------------
znvoani gmake@4.4.1%gcc
qfb3pvm tcl@8.6.12%gcc
znvoani gmake@4.4.1%gcc
npuw4up zlib-ng@2.0.7%gcc cflags="-O3"
tt2hv6r tcl@8.6.12%gcc
znvoani gmake@4.4.1%gcc
5xcetrv zlib-ng@2.1.4%gcc
ffnsgi6 zlib-ng@2.0.7%gcc
znvoani gmake@4.4.1%gcc
npuw4up zlib-ng@2.0.7%gcc cflags="-O3"
znvoani gmake@4.4.1%gcc
5xcetrv zlib-ng@2.1.4%gcc
znvoani gmake@4.4.1%gcc
==> 12 installed packages
Let’s move on to slightly more complicated packages. HDF5 is a good example of a more complicated package, with an MPI dependency. If we install it “out of the box,” it will build with OpenMPI.
$ spack install hdf5
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/gmake-4.4.1-znvoaniggvauzxv4yobchqt4g7tyjuc7
==> Installing ca-certificates-mozilla-2023-05-30-ct4al4udowha5xuopzhn3elwj2tsjomj [2/41]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-ca-certificates-mozilla-2023-05-30-ct4al4udowha5xuopzhn3elwj2tsjomj.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/ca-certificates-mozilla-2023-05-30/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-ca-certificates-mozilla-2023-05-30-ct4al4udowha5xuopzhn3elwj2tsjomj.spack
==> Extracting ca-certificates-mozilla-2023-05-30-ct4al4udowha5xuopzhn3elwj2tsjomj from binary cache
==> ca-certificates-mozilla: Successfully installed ca-certificates-mozilla-2023-05-30-ct4al4udowha5xuopzhn3elwj2tsjomj
Search: 0.00s. Fetch: 0.09s. Install: 0.04s. Extract: 0.03s. Relocate: 0.00s. Total: 0.13s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/ca-certificates-mozilla-2023-05-30-ct4al4udowha5xuopzhn3elwj2tsjomj
==> Installing zstd-1.5.5-jkznmrmqdgtpzvs42qxljrjs6m6f6aho [3/41]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-zstd-1.5.5-jkznmrmqdgtpzvs42qxljrjs6m6f6aho.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/zstd-1.5.5/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-zstd-1.5.5-jkznmrmqdgtpzvs42qxljrjs6m6f6aho.spack
==> Extracting zstd-1.5.5-jkznmrmqdgtpzvs42qxljrjs6m6f6aho from binary cache
==> zstd: Successfully installed zstd-1.5.5-jkznmrmqdgtpzvs42qxljrjs6m6f6aho
Search: 0.00s. Fetch: 0.01s. Install: 0.05s. Extract: 0.04s. Relocate: 0.01s. Total: 0.06s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/zstd-1.5.5-jkznmrmqdgtpzvs42qxljrjs6m6f6aho
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/zlib-ng-2.1.4-5xcetrvs3fzd7k27dw5duyxitnsy4uvh
==> Installing pkgconf-1.9.5-zjgtpdofa5acoyfs62cczvdj3gjngy3y [5/41]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-pkgconf-1.9.5-zjgtpdofa5acoyfs62cczvdj3gjngy3y.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/pkgconf-1.9.5/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-pkgconf-1.9.5-zjgtpdofa5acoyfs62cczvdj3gjngy3y.spack
==> Extracting pkgconf-1.9.5-zjgtpdofa5acoyfs62cczvdj3gjngy3y from binary cache
==> pkgconf: Successfully installed pkgconf-1.9.5-zjgtpdofa5acoyfs62cczvdj3gjngy3y
Search: 0.00s. Fetch: 0.01s. Install: 0.03s. Extract: 0.02s. Relocate: 0.01s. Total: 0.04s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/pkgconf-1.9.5-zjgtpdofa5acoyfs62cczvdj3gjngy3y
==> Installing findutils-4.9.0-cws3eftnvff7shmr3acylis3utohkxfn [6/41]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-findutils-4.9.0-cws3eftnvff7shmr3acylis3utohkxfn.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/findutils-4.9.0/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-findutils-4.9.0-cws3eftnvff7shmr3acylis3utohkxfn.spack
==> Extracting findutils-4.9.0-cws3eftnvff7shmr3acylis3utohkxfn from binary cache
==> findutils: Successfully installed findutils-4.9.0-cws3eftnvff7shmr3acylis3utohkxfn
Search: 0.00s. Fetch: 0.01s. Install: 0.06s. Extract: 0.05s. Relocate: 0.01s. Total: 0.07s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/findutils-4.9.0-cws3eftnvff7shmr3acylis3utohkxfn
==> Installing berkeley-db-18.1.40-ku7makqmto7yrue2y3duu2phqtnvqd26 [7/41]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-berkeley-db-18.1.40-ku7makqmto7yrue2y3duu2phqtnvqd26.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/berkeley-db-18.1.40/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-berkeley-db-18.1.40-ku7makqmto7yrue2y3duu2phqtnvqd26.spack
==> Extracting berkeley-db-18.1.40-ku7makqmto7yrue2y3duu2phqtnvqd26 from binary cache
==> berkeley-db: Successfully installed berkeley-db-18.1.40-ku7makqmto7yrue2y3duu2phqtnvqd26
Search: 0.00s. Fetch: 0.01s. Install: 0.10s. Extract: 0.08s. Relocate: 0.01s. Total: 0.11s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/berkeley-db-18.1.40-ku7makqmto7yrue2y3duu2phqtnvqd26
==> Installing xz-5.4.1-axxqoeqv4lckdxrkvdp6f376ndmade4c [8/41]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-xz-5.4.1-axxqoeqv4lckdxrkvdp6f376ndmade4c.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/xz-5.4.1/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-xz-5.4.1-axxqoeqv4lckdxrkvdp6f376ndmade4c.spack
==> Extracting xz-5.4.1-axxqoeqv4lckdxrkvdp6f376ndmade4c from binary cache
==> xz: Successfully installed xz-5.4.1-axxqoeqv4lckdxrkvdp6f376ndmade4c
Search: 0.00s. Fetch: 0.01s. Install: 0.08s. Extract: 0.07s. Relocate: 0.01s. Total: 0.09s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/xz-5.4.1-axxqoeqv4lckdxrkvdp6f376ndmade4c
==> Installing libiconv-1.17-ivn4eq42mmvco5l3drcxjzbmpto5nfi2 [9/41]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-libiconv-1.17-ivn4eq42mmvco5l3drcxjzbmpto5nfi2.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/libiconv-1.17/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-libiconv-1.17-ivn4eq42mmvco5l3drcxjzbmpto5nfi2.spack
==> Extracting libiconv-1.17-ivn4eq42mmvco5l3drcxjzbmpto5nfi2 from binary cache
==> libiconv: Successfully installed libiconv-1.17-ivn4eq42mmvco5l3drcxjzbmpto5nfi2
Search: 0.00s. Fetch: 0.01s. Install: 0.07s. Extract: 0.06s. Relocate: 0.01s. Total: 0.08s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/libiconv-1.17-ivn4eq42mmvco5l3drcxjzbmpto5nfi2
==> Installing libsigsegv-2.14-zuopqrik4y7vhqq2isjnr6mbixyks4uk [10/41]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-libsigsegv-2.14-zuopqrik4y7vhqq2isjnr6mbixyks4uk.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/libsigsegv-2.14/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-libsigsegv-2.14-zuopqrik4y7vhqq2isjnr6mbixyks4uk.spack
==> Extracting libsigsegv-2.14-zuopqrik4y7vhqq2isjnr6mbixyks4uk from binary cache
==> libsigsegv: Successfully installed libsigsegv-2.14-zuopqrik4y7vhqq2isjnr6mbixyks4uk
Search: 0.00s. Fetch: 0.01s. Install: 0.02s. Extract: 0.01s. Relocate: 0.01s. Total: 0.03s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/libsigsegv-2.14-zuopqrik4y7vhqq2isjnr6mbixyks4uk
==> Installing util-macros-1.19.3-b7j7735jjga7hkzuwzrwvzqnatlld2nb [11/41]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-util-macros-1.19.3-b7j7735jjga7hkzuwzrwvzqnatlld2nb.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/util-macros-1.19.3/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-util-macros-1.19.3-b7j7735jjga7hkzuwzrwvzqnatlld2nb.spack
==> Extracting util-macros-1.19.3-b7j7735jjga7hkzuwzrwvzqnatlld2nb from binary cache
==> util-macros: Successfully installed util-macros-1.19.3-b7j7735jjga7hkzuwzrwvzqnatlld2nb
Search: 0.00s. Fetch: 0.01s. Install: 0.01s. Extract: 0.01s. Relocate: 0.01s. Total: 0.02s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/util-macros-1.19.3-b7j7735jjga7hkzuwzrwvzqnatlld2nb
==> Installing pigz-2.7-catlxmodt7sirns2di5pod576omq32hk [12/41]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-pigz-2.7-catlxmodt7sirns2di5pod576omq32hk.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/pigz-2.7/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-pigz-2.7-catlxmodt7sirns2di5pod576omq32hk.spack
==> Extracting pigz-2.7-catlxmodt7sirns2di5pod576omq32hk from binary cache
==> pigz: Successfully installed pigz-2.7-catlxmodt7sirns2di5pod576omq32hk
Search: 0.00s. Fetch: 0.01s. Install: 0.02s. Extract: 0.01s. Relocate: 0.01s. Total: 0.03s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/pigz-2.7-catlxmodt7sirns2di5pod576omq32hk
==> Installing ncurses-6.4-qqlh6asufg6vhjnkbhwxl3jmocyolykt [13/41]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-ncurses-6.4-qqlh6asufg6vhjnkbhwxl3jmocyolykt.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/ncurses-6.4/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-ncurses-6.4-qqlh6asufg6vhjnkbhwxl3jmocyolykt.spack
==> Extracting ncurses-6.4-qqlh6asufg6vhjnkbhwxl3jmocyolykt from binary cache
==> ncurses: Successfully installed ncurses-6.4-qqlh6asufg6vhjnkbhwxl3jmocyolykt
Search: 0.00s. Fetch: 0.01s. Install: 0.61s. Extract: 0.59s. Relocate: 0.01s. Total: 0.63s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/ncurses-6.4-qqlh6asufg6vhjnkbhwxl3jmocyolykt
==> Installing nghttp2-1.57.0-my64owhngq5r4nl2lpysh2skvrq3nlo5 [14/41]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-nghttp2-1.57.0-my64owhngq5r4nl2lpysh2skvrq3nlo5.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/nghttp2-1.57.0/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-nghttp2-1.57.0-my64owhngq5r4nl2lpysh2skvrq3nlo5.spack
==> Extracting nghttp2-1.57.0-my64owhngq5r4nl2lpysh2skvrq3nlo5 from binary cache
==> nghttp2: Successfully installed nghttp2-1.57.0-my64owhngq5r4nl2lpysh2skvrq3nlo5
Search: 0.00s. Fetch: 0.01s. Install: 0.05s. Extract: 0.03s. Relocate: 0.01s. Total: 0.05s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/nghttp2-1.57.0-my64owhngq5r4nl2lpysh2skvrq3nlo5
==> Installing libxml2-2.10.3-67qoxbv3pyyep745wytvlgnnosn6pwnr [15/41]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-libxml2-2.10.3-67qoxbv3pyyep745wytvlgnnosn6pwnr.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/libxml2-2.10.3/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-libxml2-2.10.3-67qoxbv3pyyep745wytvlgnnosn6pwnr.spack
==> Extracting libxml2-2.10.3-67qoxbv3pyyep745wytvlgnnosn6pwnr from binary cache
==> libxml2: Successfully installed libxml2-2.10.3-67qoxbv3pyyep745wytvlgnnosn6pwnr
Search: 0.00s. Fetch: 0.01s. Install: 0.12s. Extract: 0.10s. Relocate: 0.01s. Total: 0.13s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/libxml2-2.10.3-67qoxbv3pyyep745wytvlgnnosn6pwnr
==> Installing diffutils-3.9-ueheij3wbhepmelnkti3jsglzzknb4en [16/41]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-diffutils-3.9-ueheij3wbhepmelnkti3jsglzzknb4en.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/diffutils-3.9/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-diffutils-3.9-ueheij3wbhepmelnkti3jsglzzknb4en.spack
==> Extracting diffutils-3.9-ueheij3wbhepmelnkti3jsglzzknb4en from binary cache
==> diffutils: Successfully installed diffutils-3.9-ueheij3wbhepmelnkti3jsglzzknb4en
Search: 0.00s. Fetch: 0.01s. Install: 0.06s. Extract: 0.04s. Relocate: 0.01s. Total: 0.06s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/diffutils-3.9-ueheij3wbhepmelnkti3jsglzzknb4en
==> Installing libedit-3.1-20210216-s4kq4wo6ii3vt3s354agguqm462yu32q [17/41]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-libedit-3.1-20210216-s4kq4wo6ii3vt3s354agguqm462yu32q.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/libedit-3.1-20210216/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-libedit-3.1-20210216-s4kq4wo6ii3vt3s354agguqm462yu32q.spack
==> Extracting libedit-3.1-20210216-s4kq4wo6ii3vt3s354agguqm462yu32q from binary cache
==> libedit: Successfully installed libedit-3.1-20210216-s4kq4wo6ii3vt3s354agguqm462yu32q
Search: 0.00s. Fetch: 0.01s. Install: 0.04s. Extract: 0.03s. Relocate: 0.01s. Total: 0.05s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/libedit-3.1-20210216-s4kq4wo6ii3vt3s354agguqm462yu32q
==> Installing readline-8.2-xxgqlmjyegrwwuq2pq4zaq7y6qojp3mz [18/41]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-readline-8.2-xxgqlmjyegrwwuq2pq4zaq7y6qojp3mz.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/readline-8.2/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-readline-8.2-xxgqlmjyegrwwuq2pq4zaq7y6qojp3mz.spack
==> Extracting readline-8.2-xxgqlmjyegrwwuq2pq4zaq7y6qojp3mz from binary cache
==> readline: Successfully installed readline-8.2-xxgqlmjyegrwwuq2pq4zaq7y6qojp3mz
Search: 0.00s. Fetch: 0.01s. Install: 0.06s. Extract: 0.05s. Relocate: 0.01s. Total: 0.07s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/readline-8.2-xxgqlmjyegrwwuq2pq4zaq7y6qojp3mz
==> Installing bzip2-1.0.8-4oz3kpfibmlvfizzivudj7pnzm2w7ce7 [19/41]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-bzip2-1.0.8-4oz3kpfibmlvfizzivudj7pnzm2w7ce7.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/bzip2-1.0.8/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-bzip2-1.0.8-4oz3kpfibmlvfizzivudj7pnzm2w7ce7.spack
==> Extracting bzip2-1.0.8-4oz3kpfibmlvfizzivudj7pnzm2w7ce7 from binary cache
==> bzip2: Successfully installed bzip2-1.0.8-4oz3kpfibmlvfizzivudj7pnzm2w7ce7
Search: 0.00s. Fetch: 0.01s. Install: 0.03s. Extract: 0.02s. Relocate: 0.01s. Total: 0.04s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/bzip2-1.0.8-4oz3kpfibmlvfizzivudj7pnzm2w7ce7
==> Installing m4-1.4.19-jnv5nut43juhm7esjn3tvxas6m67zbx4 [20/41]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-m4-1.4.19-jnv5nut43juhm7esjn3tvxas6m67zbx4.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/m4-1.4.19/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-m4-1.4.19-jnv5nut43juhm7esjn3tvxas6m67zbx4.spack
==> Extracting m4-1.4.19-jnv5nut43juhm7esjn3tvxas6m67zbx4 from binary cache
==> m4: Successfully installed m4-1.4.19-jnv5nut43juhm7esjn3tvxas6m67zbx4
Search: 0.00s. Fetch: 0.01s. Install: 0.05s. Extract: 0.03s. Relocate: 0.01s. Total: 0.05s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/m4-1.4.19-jnv5nut43juhm7esjn3tvxas6m67zbx4
==> Installing gdbm-1.23-m626hzwxamau2a4cbu2hptq477qnufc4 [21/41]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-gdbm-1.23-m626hzwxamau2a4cbu2hptq477qnufc4.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/gdbm-1.23/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-gdbm-1.23-m626hzwxamau2a4cbu2hptq477qnufc4.spack
==> Extracting gdbm-1.23-m626hzwxamau2a4cbu2hptq477qnufc4 from binary cache
==> gdbm: Successfully installed gdbm-1.23-m626hzwxamau2a4cbu2hptq477qnufc4
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[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/gdbm-1.23-m626hzwxamau2a4cbu2hptq477qnufc4
==> Installing tar-1.34-vdb3ozocdu73c4gl45gnzcjgscfye6mg [22/41]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-tar-1.34-vdb3ozocdu73c4gl45gnzcjgscfye6mg.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/tar-1.34/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-tar-1.34-vdb3ozocdu73c4gl45gnzcjgscfye6mg.spack
==> Extracting tar-1.34-vdb3ozocdu73c4gl45gnzcjgscfye6mg from binary cache
==> tar: Successfully installed tar-1.34-vdb3ozocdu73c4gl45gnzcjgscfye6mg
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[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/tar-1.34-vdb3ozocdu73c4gl45gnzcjgscfye6mg
==> Installing libtool-2.4.7-rgag55hxbjmkoqpx4gnr2golz2zfyvnt [23/41]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-libtool-2.4.7-rgag55hxbjmkoqpx4gnr2golz2zfyvnt.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/libtool-2.4.7/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-libtool-2.4.7-rgag55hxbjmkoqpx4gnr2golz2zfyvnt.spack
==> Extracting libtool-2.4.7-rgag55hxbjmkoqpx4gnr2golz2zfyvnt from binary cache
==> libtool: Successfully installed libtool-2.4.7-rgag55hxbjmkoqpx4gnr2golz2zfyvnt
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[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/libtool-2.4.7-rgag55hxbjmkoqpx4gnr2golz2zfyvnt
==> Installing perl-5.38.0-dg34i2ae7omo77k6ntqkb6zi76gmeava [24/41]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-perl-5.38.0-dg34i2ae7omo77k6ntqkb6zi76gmeava.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/perl-5.38.0/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-perl-5.38.0-dg34i2ae7omo77k6ntqkb6zi76gmeava.spack
==> Extracting perl-5.38.0-dg34i2ae7omo77k6ntqkb6zi76gmeava from binary cache
==> perl: Successfully installed perl-5.38.0-dg34i2ae7omo77k6ntqkb6zi76gmeava
Search: 0.00s. Fetch: 0.03s. Install: 0.75s. Extract: 0.64s. Relocate: 0.10s. Total: 0.77s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/perl-5.38.0-dg34i2ae7omo77k6ntqkb6zi76gmeava
==> Installing gettext-0.22.3-y26lmloj3u6romzd6j3xdfiib7gnkbga [25/41]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-gettext-0.22.3-y26lmloj3u6romzd6j3xdfiib7gnkbga.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/gettext-0.22.3/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-gettext-0.22.3-y26lmloj3u6romzd6j3xdfiib7gnkbga.spack
==> Extracting gettext-0.22.3-y26lmloj3u6romzd6j3xdfiib7gnkbga from binary cache
==> gettext: Successfully installed gettext-0.22.3-y26lmloj3u6romzd6j3xdfiib7gnkbga
Search: 0.00s. Fetch: 0.02s. Install: 0.62s. Extract: 0.57s. Relocate: 0.03s. Total: 0.64s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/gettext-0.22.3-y26lmloj3u6romzd6j3xdfiib7gnkbga
==> Installing libpciaccess-0.17-af4bqq6hwe23ojn7i3o2n7ws2b7wu64m [26/41]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-libpciaccess-0.17-af4bqq6hwe23ojn7i3o2n7ws2b7wu64m.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/libpciaccess-0.17/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-libpciaccess-0.17-af4bqq6hwe23ojn7i3o2n7ws2b7wu64m.spack
==> Extracting libpciaccess-0.17-af4bqq6hwe23ojn7i3o2n7ws2b7wu64m from binary cache
==> libpciaccess: Successfully installed libpciaccess-0.17-af4bqq6hwe23ojn7i3o2n7ws2b7wu64m
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[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/libpciaccess-0.17-af4bqq6hwe23ojn7i3o2n7ws2b7wu64m
==> Installing autoconf-2.69-mnfnoa5qnshe7gdq7gnlkwowqxyrymia [27/41]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-autoconf-2.69-mnfnoa5qnshe7gdq7gnlkwowqxyrymia.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/autoconf-2.69/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-autoconf-2.69-mnfnoa5qnshe7gdq7gnlkwowqxyrymia.spack
==> Extracting autoconf-2.69-mnfnoa5qnshe7gdq7gnlkwowqxyrymia from binary cache
==> autoconf: Successfully installed autoconf-2.69-mnfnoa5qnshe7gdq7gnlkwowqxyrymia
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[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/autoconf-2.69-mnfnoa5qnshe7gdq7gnlkwowqxyrymia
==> Installing openssl-3.1.3-35j7wvrf3jovxokjkzdrpv265sfrjwga [28/41]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-openssl-3.1.3-35j7wvrf3jovxokjkzdrpv265sfrjwga.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/openssl-3.1.3/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-openssl-3.1.3-35j7wvrf3jovxokjkzdrpv265sfrjwga.spack
==> Extracting openssl-3.1.3-35j7wvrf3jovxokjkzdrpv265sfrjwga from binary cache
==> openssl: Successfully installed openssl-3.1.3-35j7wvrf3jovxokjkzdrpv265sfrjwga
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[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/openssl-3.1.3-35j7wvrf3jovxokjkzdrpv265sfrjwga
==> Installing libxcrypt-4.4.35-hezcx7ggdisbf6oqol5ucfch7emlggqk [29/41]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-libxcrypt-4.4.35-hezcx7ggdisbf6oqol5ucfch7emlggqk.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/libxcrypt-4.4.35/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-libxcrypt-4.4.35-hezcx7ggdisbf6oqol5ucfch7emlggqk.spack
==> Extracting libxcrypt-4.4.35-hezcx7ggdisbf6oqol5ucfch7emlggqk from binary cache
==> libxcrypt: Successfully installed libxcrypt-4.4.35-hezcx7ggdisbf6oqol5ucfch7emlggqk
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[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/libxcrypt-4.4.35-hezcx7ggdisbf6oqol5ucfch7emlggqk
==> Installing bison-3.8.2-lza42n2wukvkldw6vcrp3iwpvw7d6oni [30/41]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-bison-3.8.2-lza42n2wukvkldw6vcrp3iwpvw7d6oni.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/bison-3.8.2/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-bison-3.8.2-lza42n2wukvkldw6vcrp3iwpvw7d6oni.spack
==> Extracting bison-3.8.2-lza42n2wukvkldw6vcrp3iwpvw7d6oni from binary cache
==> bison: Successfully installed bison-3.8.2-lza42n2wukvkldw6vcrp3iwpvw7d6oni
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[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/bison-3.8.2-lza42n2wukvkldw6vcrp3iwpvw7d6oni
==> Installing hwloc-2.9.1-dyrsjedv3fxwdi3sutxieq2rcz4etdib [31/41]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-hwloc-2.9.1-dyrsjedv3fxwdi3sutxieq2rcz4etdib.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/hwloc-2.9.1/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-hwloc-2.9.1-dyrsjedv3fxwdi3sutxieq2rcz4etdib.spack
==> Extracting hwloc-2.9.1-dyrsjedv3fxwdi3sutxieq2rcz4etdib from binary cache
==> hwloc: Successfully installed hwloc-2.9.1-dyrsjedv3fxwdi3sutxieq2rcz4etdib
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[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/hwloc-2.9.1-dyrsjedv3fxwdi3sutxieq2rcz4etdib
==> Installing automake-1.16.5-d3cncglfvi2mpx7ytpfqnleyc233qcej [32/41]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-automake-1.16.5-d3cncglfvi2mpx7ytpfqnleyc233qcej.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/automake-1.16.5/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-automake-1.16.5-d3cncglfvi2mpx7ytpfqnleyc233qcej.spack
==> Extracting automake-1.16.5-d3cncglfvi2mpx7ytpfqnleyc233qcej from binary cache
==> automake: Successfully installed automake-1.16.5-d3cncglfvi2mpx7ytpfqnleyc233qcej
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[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/automake-1.16.5-d3cncglfvi2mpx7ytpfqnleyc233qcej
==> Installing curl-8.4.0-ijsmc3jx2cjmdy2svodqqkeimkooheod [33/41]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-curl-8.4.0-ijsmc3jx2cjmdy2svodqqkeimkooheod.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/curl-8.4.0/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-curl-8.4.0-ijsmc3jx2cjmdy2svodqqkeimkooheod.spack
==> Extracting curl-8.4.0-ijsmc3jx2cjmdy2svodqqkeimkooheod from binary cache
==> curl: Successfully installed curl-8.4.0-ijsmc3jx2cjmdy2svodqqkeimkooheod
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[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/curl-8.4.0-ijsmc3jx2cjmdy2svodqqkeimkooheod
==> Installing krb5-1.20.1-tjiqlymlbmjxyyvwlkumu4qq65nuqr3w [34/41]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-krb5-1.20.1-tjiqlymlbmjxyyvwlkumu4qq65nuqr3w.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/krb5-1.20.1/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-krb5-1.20.1-tjiqlymlbmjxyyvwlkumu4qq65nuqr3w.spack
==> Extracting krb5-1.20.1-tjiqlymlbmjxyyvwlkumu4qq65nuqr3w from binary cache
==> krb5: Successfully installed krb5-1.20.1-tjiqlymlbmjxyyvwlkumu4qq65nuqr3w
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[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/krb5-1.20.1-tjiqlymlbmjxyyvwlkumu4qq65nuqr3w
==> Installing libevent-2.1.12-wpvxxkafb3j7uc465iekvpyhew3brhl7 [35/41]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-libevent-2.1.12-wpvxxkafb3j7uc465iekvpyhew3brhl7.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/libevent-2.1.12/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-libevent-2.1.12-wpvxxkafb3j7uc465iekvpyhew3brhl7.spack
==> Extracting libevent-2.1.12-wpvxxkafb3j7uc465iekvpyhew3brhl7 from binary cache
==> libevent: Successfully installed libevent-2.1.12-wpvxxkafb3j7uc465iekvpyhew3brhl7
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[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/libevent-2.1.12-wpvxxkafb3j7uc465iekvpyhew3brhl7
==> Installing numactl-2.0.14-mbwdizyinycylldk4lrjvq2y474cd5bk [36/41]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-numactl-2.0.14-mbwdizyinycylldk4lrjvq2y474cd5bk.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/numactl-2.0.14/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-numactl-2.0.14-mbwdizyinycylldk4lrjvq2y474cd5bk.spack
==> Extracting numactl-2.0.14-mbwdizyinycylldk4lrjvq2y474cd5bk from binary cache
==> numactl: Successfully installed numactl-2.0.14-mbwdizyinycylldk4lrjvq2y474cd5bk
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[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/numactl-2.0.14-mbwdizyinycylldk4lrjvq2y474cd5bk
==> Installing cmake-3.27.7-kd6xihnhlzyfwafeilow6t2mvolyryor [37/41]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-cmake-3.27.7-kd6xihnhlzyfwafeilow6t2mvolyryor.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/cmake-3.27.7/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-cmake-3.27.7-kd6xihnhlzyfwafeilow6t2mvolyryor.spack
==> Extracting cmake-3.27.7-kd6xihnhlzyfwafeilow6t2mvolyryor from binary cache
==> cmake: Successfully installed cmake-3.27.7-kd6xihnhlzyfwafeilow6t2mvolyryor
Search: 0.00s. Fetch: 0.04s. Install: 1.19s. Extract: 1.09s. Relocate: 0.09s. Total: 1.23s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/cmake-3.27.7-kd6xihnhlzyfwafeilow6t2mvolyryor
==> Installing openssh-9.5p1-zjwxy3znkrc3yslkm3eoyewet5bxacjc [38/41]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-openssh-9.5p1-zjwxy3znkrc3yslkm3eoyewet5bxacjc.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/openssh-9.5p1/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-openssh-9.5p1-zjwxy3znkrc3yslkm3eoyewet5bxacjc.spack
==> Extracting openssh-9.5p1-zjwxy3znkrc3yslkm3eoyewet5bxacjc from binary cache
==> openssh: Successfully installed openssh-9.5p1-zjwxy3znkrc3yslkm3eoyewet5bxacjc
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[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/openssh-9.5p1-zjwxy3znkrc3yslkm3eoyewet5bxacjc
==> Installing pmix-5.0.1-fhkyvm3nsv5cjxhfszdx2y3rieh274vn [39/41]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-pmix-5.0.1-fhkyvm3nsv5cjxhfszdx2y3rieh274vn.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/pmix-5.0.1/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-pmix-5.0.1-fhkyvm3nsv5cjxhfszdx2y3rieh274vn.spack
==> Extracting pmix-5.0.1-fhkyvm3nsv5cjxhfszdx2y3rieh274vn from binary cache
==> pmix: Successfully installed pmix-5.0.1-fhkyvm3nsv5cjxhfszdx2y3rieh274vn
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[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/pmix-5.0.1-fhkyvm3nsv5cjxhfszdx2y3rieh274vn
==> Installing openmpi-4.1.6-z4iqm7nipxsdam3chio7r74ob3cznoof [40/41]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-openmpi-4.1.6-z4iqm7nipxsdam3chio7r74ob3cznoof.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/openmpi-4.1.6/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-openmpi-4.1.6-z4iqm7nipxsdam3chio7r74ob3cznoof.spack
==> Extracting openmpi-4.1.6-z4iqm7nipxsdam3chio7r74ob3cznoof from binary cache
==> openmpi: Successfully installed openmpi-4.1.6-z4iqm7nipxsdam3chio7r74ob3cznoof
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[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/openmpi-4.1.6-z4iqm7nipxsdam3chio7r74ob3cznoof
==> Installing hdf5-1.14.3-7eeohwaegvx2xa3ybcdsont2qmllii2i [41/41]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-hdf5-1.14.3-7eeohwaegvx2xa3ybcdsont2qmllii2i.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/hdf5-1.14.3/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-hdf5-1.14.3-7eeohwaegvx2xa3ybcdsont2qmllii2i.spack
==> Extracting hdf5-1.14.3-7eeohwaegvx2xa3ybcdsont2qmllii2i from binary cache
==> hdf5: Successfully installed hdf5-1.14.3-7eeohwaegvx2xa3ybcdsont2qmllii2i
Search: 0.00s. Fetch: 0.05s. Install: 0.96s. Extract: 0.86s. Relocate: 0.09s. Total: 1.02s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/hdf5-1.14.3-7eeohwaegvx2xa3ybcdsont2qmllii2i
Spack packages can also have build options, called variants. Boolean
variants can be specified using the + (enable) and ~ or -
(disable) sigils. There are two sigils for “disable” to avoid conflicts
with shell parsing in different situations. Variants (boolean or
otherwise) can also be specified using the same syntax as compiler flags.
Here we can install HDF5 without MPI support.
$ spack install hdf5~mpi
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/nghttp2-1.57.0-my64owhngq5r4nl2lpysh2skvrq3nlo5
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/zlib-ng-2.1.4-5xcetrvs3fzd7k27dw5duyxitnsy4uvh
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/ncurses-6.4-qqlh6asufg6vhjnkbhwxl3jmocyolykt
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/gmake-4.4.1-znvoaniggvauzxv4yobchqt4g7tyjuc7
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/openssl-3.1.3-35j7wvrf3jovxokjkzdrpv265sfrjwga
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/pkgconf-1.9.5-zjgtpdofa5acoyfs62cczvdj3gjngy3y
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/curl-8.4.0-ijsmc3jx2cjmdy2svodqqkeimkooheod
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/cmake-3.27.7-kd6xihnhlzyfwafeilow6t2mvolyryor
==> Installing hdf5-1.14.3-scxtjf3337ivhhuegqzfrpzvls7c5qbb [9/9]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-hdf5-1.14.3-scxtjf3337ivhhuegqzfrpzvls7c5qbb.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/hdf5-1.14.3/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-hdf5-1.14.3-scxtjf3337ivhhuegqzfrpzvls7c5qbb.spack
==> Extracting hdf5-1.14.3-scxtjf3337ivhhuegqzfrpzvls7c5qbb from binary cache
==> hdf5: Successfully installed hdf5-1.14.3-scxtjf3337ivhhuegqzfrpzvls7c5qbb
Search: 0.00s. Fetch: 0.15s. Install: 0.79s. Extract: 0.73s. Relocate: 0.05s. Total: 0.94s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/hdf5-1.14.3-scxtjf3337ivhhuegqzfrpzvls7c5qbb
We might also want to install HDF5 with a different MPI
implementation. While MPI is not a package itself, packages can depend on
abstract interfaces like MPI. Spack handles these through “virtual
dependencies.” A package, such as HDF5, can depend on the MPI
interface. Other packages (openmpi, mpich, mvapich2, etc.)
provide the MPI interface. Any of these providers can be requested for
an MPI dependency. For example, we can build HDF5 with MPI support
provided by MPICH by specifying a dependency on mpich. Spack also
supports versioning of virtual dependencies. A package can depend on the
MPI interface at version 3, and provider packages specify what version of
the interface they provide. The partial spec ^mpi@3 can be satisfied
by any of several providers.
$ spack install hdf5+hl+mpi ^mpich
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/nghttp2-1.57.0-my64owhngq5r4nl2lpysh2skvrq3nlo5
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/zlib-ng-2.1.4-5xcetrvs3fzd7k27dw5duyxitnsy4uvh
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/ncurses-6.4-qqlh6asufg6vhjnkbhwxl3jmocyolykt
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/gmake-4.4.1-znvoaniggvauzxv4yobchqt4g7tyjuc7
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/bzip2-1.0.8-4oz3kpfibmlvfizzivudj7pnzm2w7ce7
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/openssl-3.1.3-35j7wvrf3jovxokjkzdrpv265sfrjwga
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/libtool-2.4.7-rgag55hxbjmkoqpx4gnr2golz2zfyvnt
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/findutils-4.9.0-cws3eftnvff7shmr3acylis3utohkxfn
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/pkgconf-1.9.5-zjgtpdofa5acoyfs62cczvdj3gjngy3y
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/xz-5.4.1-axxqoeqv4lckdxrkvdp6f376ndmade4c
==> Installing libmd-1.0.4-kg5ets2yozvitt2jh3zemld7y3l3zjbl [11/40]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-libmd-1.0.4-kg5ets2yozvitt2jh3zemld7y3l3zjbl.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/libmd-1.0.4/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-libmd-1.0.4-kg5ets2yozvitt2jh3zemld7y3l3zjbl.spack
==> Extracting libmd-1.0.4-kg5ets2yozvitt2jh3zemld7y3l3zjbl from binary cache
==> libmd: Successfully installed libmd-1.0.4-kg5ets2yozvitt2jh3zemld7y3l3zjbl
Search: 0.00s. Fetch: 0.10s. Install: 0.08s. Extract: 0.06s. Relocate: 0.01s. Total: 0.18s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/libmd-1.0.4-kg5ets2yozvitt2jh3zemld7y3l3zjbl
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/readline-8.2-xxgqlmjyegrwwuq2pq4zaq7y6qojp3mz
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/zstd-1.5.5-jkznmrmqdgtpzvs42qxljrjs6m6f6aho
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/libxcrypt-4.4.35-hezcx7ggdisbf6oqol5ucfch7emlggqk
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/libsigsegv-2.14-zuopqrik4y7vhqq2isjnr6mbixyks4uk
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/pigz-2.7-catlxmodt7sirns2di5pod576omq32hk
==> Installing libffi-3.4.4-ra2t3ha2gt2svq4tygpxxjvdwd4naz3h [17/40]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-libffi-3.4.4-ra2t3ha2gt2svq4tygpxxjvdwd4naz3h.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/libffi-3.4.4/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-libffi-3.4.4-ra2t3ha2gt2svq4tygpxxjvdwd4naz3h.spack
==> Extracting libffi-3.4.4-ra2t3ha2gt2svq4tygpxxjvdwd4naz3h from binary cache
==> libffi: Successfully installed libffi-3.4.4-ra2t3ha2gt2svq4tygpxxjvdwd4naz3h
Search: 0.00s. Fetch: 0.01s. Install: 0.03s. Extract: 0.01s. Relocate: 0.01s. Total: 0.04s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/libffi-3.4.4-ra2t3ha2gt2svq4tygpxxjvdwd4naz3h
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/berkeley-db-18.1.40-ku7makqmto7yrue2y3duu2phqtnvqd26
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/libiconv-1.17-ivn4eq42mmvco5l3drcxjzbmpto5nfi2
==> Installing libfabric-1.19.0-voxng34f553p4suxv7cdrbeyk2li3nje [20/40]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-libfabric-1.19.0-voxng34f553p4suxv7cdrbeyk2li3nje.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/libfabric-1.19.0/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-libfabric-1.19.0-voxng34f553p4suxv7cdrbeyk2li3nje.spack
==> Extracting libfabric-1.19.0-voxng34f553p4suxv7cdrbeyk2li3nje from binary cache
==> libfabric: Successfully installed libfabric-1.19.0-voxng34f553p4suxv7cdrbeyk2li3nje
Search: 0.00s. Fetch: 0.01s. Install: 0.08s. Extract: 0.07s. Relocate: 0.01s. Total: 0.09s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/libfabric-1.19.0-voxng34f553p4suxv7cdrbeyk2li3nje
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/curl-8.4.0-ijsmc3jx2cjmdy2svodqqkeimkooheod
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/libpciaccess-0.17-af4bqq6hwe23ojn7i3o2n7ws2b7wu64m
==> Installing util-linux-uuid-2.38.1-thv4zdpqlzulq6dzneomha3i3wdkmmtt [23/40]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-util-linux-uuid-2.38.1-thv4zdpqlzulq6dzneomha3i3wdkmmtt.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/util-linux-uuid-2.38.1/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-util-linux-uuid-2.38.1-thv4zdpqlzulq6dzneomha3i3wdkmmtt.spack
==> Extracting util-linux-uuid-2.38.1-thv4zdpqlzulq6dzneomha3i3wdkmmtt from binary cache
==> util-linux-uuid: Successfully installed util-linux-uuid-2.38.1-thv4zdpqlzulq6dzneomha3i3wdkmmtt
Search: 0.00s. Fetch: 0.01s. Install: 0.11s. Extract: 0.09s. Relocate: 0.01s. Total: 0.12s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/util-linux-uuid-2.38.1-thv4zdpqlzulq6dzneomha3i3wdkmmtt
==> Installing libbsd-0.11.7-nrlj4tjdnkqa5cuwg5cs5ln5sduh6ix5 [24/40]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-libbsd-0.11.7-nrlj4tjdnkqa5cuwg5cs5ln5sduh6ix5.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/libbsd-0.11.7/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-libbsd-0.11.7-nrlj4tjdnkqa5cuwg5cs5ln5sduh6ix5.spack
==> Extracting libbsd-0.11.7-nrlj4tjdnkqa5cuwg5cs5ln5sduh6ix5 from binary cache
==> libbsd: Successfully installed libbsd-0.11.7-nrlj4tjdnkqa5cuwg5cs5ln5sduh6ix5
Search: 0.00s. Fetch: 0.01s. Install: 0.07s. Extract: 0.06s. Relocate: 0.01s. Total: 0.08s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/libbsd-0.11.7-nrlj4tjdnkqa5cuwg5cs5ln5sduh6ix5
==> Installing sqlite-3.43.2-m2h5dlyuaedkfodlyjmslhvmztd7jopi [25/40]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-sqlite-3.43.2-m2h5dlyuaedkfodlyjmslhvmztd7jopi.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/sqlite-3.43.2/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-sqlite-3.43.2-m2h5dlyuaedkfodlyjmslhvmztd7jopi.spack
==> Extracting sqlite-3.43.2-m2h5dlyuaedkfodlyjmslhvmztd7jopi from binary cache
==> sqlite: Successfully installed sqlite-3.43.2-m2h5dlyuaedkfodlyjmslhvmztd7jopi
Search: 0.00s. Fetch: 0.02s. Install: 0.31s. Extract: 0.27s. Relocate: 0.03s. Total: 0.34s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/sqlite-3.43.2-m2h5dlyuaedkfodlyjmslhvmztd7jopi
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/gdbm-1.23-m626hzwxamau2a4cbu2hptq477qnufc4
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/m4-1.4.19-jnv5nut43juhm7esjn3tvxas6m67zbx4
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/tar-1.34-vdb3ozocdu73c4gl45gnzcjgscfye6mg
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/libxml2-2.10.3-67qoxbv3pyyep745wytvlgnnosn6pwnr
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/cmake-3.27.7-kd6xihnhlzyfwafeilow6t2mvolyryor
==> Installing expat-2.5.0-demnlleyekfpzroyoll2jcki6wxttwhw [31/40]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-expat-2.5.0-demnlleyekfpzroyoll2jcki6wxttwhw.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/expat-2.5.0/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-expat-2.5.0-demnlleyekfpzroyoll2jcki6wxttwhw.spack
==> Extracting expat-2.5.0-demnlleyekfpzroyoll2jcki6wxttwhw from binary cache
==> expat: Successfully installed expat-2.5.0-demnlleyekfpzroyoll2jcki6wxttwhw
Search: 0.00s. Fetch: 0.01s. Install: 0.06s. Extract: 0.03s. Relocate: 0.01s. Total: 0.07s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/expat-2.5.0-demnlleyekfpzroyoll2jcki6wxttwhw
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/perl-5.38.0-dg34i2ae7omo77k6ntqkb6zi76gmeava
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/hwloc-2.9.1-dyrsjedv3fxwdi3sutxieq2rcz4etdib
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/gettext-0.22.3-y26lmloj3u6romzd6j3xdfiib7gnkbga
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/automake-1.16.5-d3cncglfvi2mpx7ytpfqnleyc233qcej
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/autoconf-2.69-mnfnoa5qnshe7gdq7gnlkwowqxyrymia
==> Installing python-3.11.6-ybsi7tlnssr3m4h3eqrzq6tyxdcsr2n7 [37/40]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-python-3.11.6-ybsi7tlnssr3m4h3eqrzq6tyxdcsr2n7.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/python-3.11.6/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-python-3.11.6-ybsi7tlnssr3m4h3eqrzq6tyxdcsr2n7.spack
==> Extracting python-3.11.6-ybsi7tlnssr3m4h3eqrzq6tyxdcsr2n7 from binary cache
==> python: Successfully installed python-3.11.6-ybsi7tlnssr3m4h3eqrzq6tyxdcsr2n7
Search: 0.00s. Fetch: 0.14s. Install: 3.89s. Extract: 3.64s. Relocate: 0.23s. Total: 4.03s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/python-3.11.6-ybsi7tlnssr3m4h3eqrzq6tyxdcsr2n7
==> Installing yaksa-0.3-qrx4ymppmpsvloibdgwgao722aoaymz4 [38/40]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-yaksa-0.3-qrx4ymppmpsvloibdgwgao722aoaymz4.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/yaksa-0.3/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-yaksa-0.3-qrx4ymppmpsvloibdgwgao722aoaymz4.spack
==> Extracting yaksa-0.3-qrx4ymppmpsvloibdgwgao722aoaymz4 from binary cache
==> yaksa: Successfully installed yaksa-0.3-qrx4ymppmpsvloibdgwgao722aoaymz4
Search: 0.00s. Fetch: 0.04s. Install: 0.48s. Extract: 0.42s. Relocate: 0.04s. Total: 0.52s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/yaksa-0.3-qrx4ymppmpsvloibdgwgao722aoaymz4
==> Installing mpich-4.1.2-l3z27rrcuod3irlyhu4nehjxridjaeam [39/40]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-mpich-4.1.2-l3z27rrcuod3irlyhu4nehjxridjaeam.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/mpich-4.1.2/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-mpich-4.1.2-l3z27rrcuod3irlyhu4nehjxridjaeam.spack
==> Extracting mpich-4.1.2-l3z27rrcuod3irlyhu4nehjxridjaeam from binary cache
==> mpich: Successfully installed mpich-4.1.2-l3z27rrcuod3irlyhu4nehjxridjaeam
Search: 0.00s. Fetch: 0.03s. Install: 1.01s. Extract: 0.96s. Relocate: 0.03s. Total: 1.04s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/mpich-4.1.2-l3z27rrcuod3irlyhu4nehjxridjaeam
==> Installing hdf5-1.14.3-54ik6mvay2cwhoznzuhkud57dqeat7mj [40/40]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-hdf5-1.14.3-54ik6mvay2cwhoznzuhkud57dqeat7mj.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/hdf5-1.14.3/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-hdf5-1.14.3-54ik6mvay2cwhoznzuhkud57dqeat7mj.spack
==> Extracting hdf5-1.14.3-54ik6mvay2cwhoznzuhkud57dqeat7mj from binary cache
==> hdf5: Successfully installed hdf5-1.14.3-54ik6mvay2cwhoznzuhkud57dqeat7mj
Search: 0.00s. Fetch: 0.06s. Install: 0.94s. Extract: 0.85s. Relocate: 0.08s. Total: 1.00s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/hdf5-1.14.3-54ik6mvay2cwhoznzuhkud57dqeat7mj
We’ll do a quick check in on what we have installed so far.
$ spack find -ldf
-- linux-ubuntu22.04-x86_64_v3 / clang@14.0.0 -------------------
d54pflh gmake@4.4.1%clang
keocaqa tcl@8.6.12%clang
d54pflh gmake@4.4.1%clang
amkpmim zlib-ng@2.0.7%clang
amkpmim zlib-ng@2.0.7%clang
d54pflh gmake@4.4.1%clang
hywknao zlib-ng@2.1.4%clang
d54pflh gmake@4.4.1%clang
-- linux-ubuntu22.04-x86_64_v3 / gcc@10.5.0 ---------------------
gexmwfh gmake@4.4.1%gcc
tm2or5e zlib-ng@2.1.4%gcc
gexmwfh gmake@4.4.1%gcc
-- linux-ubuntu22.04-x86_64_v3 / gcc@11.4.0 ---------------------
mnfnoa5 autoconf@2.69%gcc
znvoani gmake@4.4.1%gcc
jnv5nut m4@1.4.19%gcc
ueheij3 diffutils@3.9%gcc
ivn4eq4 libiconv@1.17%gcc
zuopqri libsigsegv@2.14%gcc
dg34i2a perl@5.38.0%gcc
ku7makq berkeley-db@18.1.40%gcc
4oz3kpf bzip2@1.0.8%gcc
m626hzw gdbm@1.23%gcc
xxgqlmj readline@8.2%gcc
qqlh6as ncurses@6.4%gcc
zjgtpdo pkgconf@1.9.5%gcc
5xcetrv zlib-ng@2.1.4%gcc
d3cncgl automake@1.16.5%gcc
mnfnoa5 autoconf@2.69%gcc
jnv5nut m4@1.4.19%gcc
ueheij3 diffutils@3.9%gcc
ivn4eq4 libiconv@1.17%gcc
zuopqri libsigsegv@2.14%gcc
znvoani gmake@4.4.1%gcc
dg34i2a perl@5.38.0%gcc
ku7makq berkeley-db@18.1.40%gcc
4oz3kpf bzip2@1.0.8%gcc
m626hzw gdbm@1.23%gcc
xxgqlmj readline@8.2%gcc
qqlh6as ncurses@6.4%gcc
zjgtpdo pkgconf@1.9.5%gcc
5xcetrv zlib-ng@2.1.4%gcc
ku7makq berkeley-db@18.1.40%gcc
znvoani gmake@4.4.1%gcc
lza42n2 bison@3.8.2%gcc
ueheij3 diffutils@3.9%gcc
ivn4eq4 libiconv@1.17%gcc
y26lmlo gettext@0.22.3%gcc
4oz3kpf bzip2@1.0.8%gcc
67qoxbv libxml2@2.10.3%gcc
zjgtpdo pkgconf@1.9.5%gcc
qqlh6as ncurses@6.4%gcc
vdb3ozo tar@1.34%gcc
catlxmo pigz@2.7%gcc
jkznmrm zstd@1.5.5%gcc
axxqoeq xz@5.4.1%gcc
znvoani gmake@4.4.1%gcc
jnv5nut m4@1.4.19%gcc
zuopqri libsigsegv@2.14%gcc
dg34i2a perl@5.38.0%gcc
ku7makq berkeley-db@18.1.40%gcc
m626hzw gdbm@1.23%gcc
xxgqlmj readline@8.2%gcc
5xcetrv zlib-ng@2.1.4%gcc
4oz3kpf bzip2@1.0.8%gcc
ueheij3 diffutils@3.9%gcc
znvoani gmake@4.4.1%gcc
ivn4eq4 libiconv@1.17%gcc
ct4al4u ca-certificates-mozilla@2023-05-30%gcc
kd6xihn cmake@3.27.7%gcc
ijsmc3j curl@8.4.0%gcc
znvoani gmake@4.4.1%gcc
my64owh nghttp2@1.57.0%gcc
35j7wvr openssl@3.1.3%gcc
ct4al4u ca-certificates-mozilla@2023-05-30%gcc
dg34i2a perl@5.38.0%gcc
ku7makq berkeley-db@18.1.40%gcc
4oz3kpf bzip2@1.0.8%gcc
ueheij3 diffutils@3.9%gcc
ivn4eq4 libiconv@1.17%gcc
m626hzw gdbm@1.23%gcc
xxgqlmj readline@8.2%gcc
zjgtpdo pkgconf@1.9.5%gcc
qqlh6as ncurses@6.4%gcc
5xcetrv zlib-ng@2.1.4%gcc
ijsmc3j curl@8.4.0%gcc
znvoani gmake@4.4.1%gcc
my64owh nghttp2@1.57.0%gcc
35j7wvr openssl@3.1.3%gcc
ct4al4u ca-certificates-mozilla@2023-05-30%gcc
dg34i2a perl@5.38.0%gcc
ku7makq berkeley-db@18.1.40%gcc
4oz3kpf bzip2@1.0.8%gcc
ueheij3 diffutils@3.9%gcc
ivn4eq4 libiconv@1.17%gcc
m626hzw gdbm@1.23%gcc
xxgqlmj readline@8.2%gcc
qqlh6as ncurses@6.4%gcc
zjgtpdo pkgconf@1.9.5%gcc
5xcetrv zlib-ng@2.1.4%gcc
ueheij3 diffutils@3.9%gcc
znvoani gmake@4.4.1%gcc
ivn4eq4 libiconv@1.17%gcc
demnlle expat@2.5.0%gcc
znvoani gmake@4.4.1%gcc
nrlj4tj libbsd@0.11.7%gcc
kg5ets2 libmd@1.0.4%gcc
cws3eft findutils@4.9.0%gcc
znvoani gmake@4.4.1%gcc
m626hzw gdbm@1.23%gcc
znvoani gmake@4.4.1%gcc
xxgqlmj readline@8.2%gcc
qqlh6as ncurses@6.4%gcc
zjgtpdo pkgconf@1.9.5%gcc
y26lmlo gettext@0.22.3%gcc
4oz3kpf bzip2@1.0.8%gcc
ueheij3 diffutils@3.9%gcc
znvoani gmake@4.4.1%gcc
ivn4eq4 libiconv@1.17%gcc
67qoxbv libxml2@2.10.3%gcc
zjgtpdo pkgconf@1.9.5%gcc
5xcetrv zlib-ng@2.1.4%gcc
qqlh6as ncurses@6.4%gcc
vdb3ozo tar@1.34%gcc
catlxmo pigz@2.7%gcc
jkznmrm zstd@1.5.5%gcc
axxqoeq xz@5.4.1%gcc
znvoani gmake@4.4.1%gcc
scxtjf3 hdf5@1.14.3%gcc
kd6xihn cmake@3.27.7%gcc
ijsmc3j curl@8.4.0%gcc
my64owh nghttp2@1.57.0%gcc
35j7wvr openssl@3.1.3%gcc
ct4al4u ca-certificates-mozilla@2023-05-30%gcc
dg34i2a perl@5.38.0%gcc
ku7makq berkeley-db@18.1.40%gcc
4oz3kpf bzip2@1.0.8%gcc
ueheij3 diffutils@3.9%gcc
ivn4eq4 libiconv@1.17%gcc
m626hzw gdbm@1.23%gcc
xxgqlmj readline@8.2%gcc
qqlh6as ncurses@6.4%gcc
znvoani gmake@4.4.1%gcc
zjgtpdo pkgconf@1.9.5%gcc
5xcetrv zlib-ng@2.1.4%gcc
7eeohwa hdf5@1.14.3%gcc
kd6xihn cmake@3.27.7%gcc
ijsmc3j curl@8.4.0%gcc
my64owh nghttp2@1.57.0%gcc
35j7wvr openssl@3.1.3%gcc
ct4al4u ca-certificates-mozilla@2023-05-30%gcc
qqlh6as ncurses@6.4%gcc
znvoani gmake@4.4.1%gcc
z4iqm7n openmpi@4.1.6%gcc
dyrsjed hwloc@2.9.1%gcc
af4bqq6 libpciaccess@0.17%gcc
b7j7735 util-macros@1.19.3%gcc
67qoxbv libxml2@2.10.3%gcc
ivn4eq4 libiconv@1.17%gcc
axxqoeq xz@5.4.1%gcc
mbwdizy numactl@2.0.14%gcc
mnfnoa5 autoconf@2.69%gcc
d3cncgl automake@1.16.5%gcc
rgag55h libtool@2.4.7%gcc
jnv5nut m4@1.4.19%gcc
ueheij3 diffutils@3.9%gcc
zuopqri libsigsegv@2.14%gcc
zjwxy3z openssh@9.5p1%gcc
tjiqlym krb5@1.20.1%gcc
lza42n2 bison@3.8.2%gcc
cws3eft findutils@4.9.0%gcc
y26lmlo gettext@0.22.3%gcc
vdb3ozo tar@1.34%gcc
catlxmo pigz@2.7%gcc
jkznmrm zstd@1.5.5%gcc
s4kq4wo libedit@3.1-20210216%gcc
hezcx7g libxcrypt@4.4.35%gcc
dg34i2a perl@5.38.0%gcc
ku7makq berkeley-db@18.1.40%gcc
4oz3kpf bzip2@1.0.8%gcc
m626hzw gdbm@1.23%gcc
xxgqlmj readline@8.2%gcc
fhkyvm3 pmix@5.0.1%gcc
wpvxxka libevent@2.1.12%gcc
zjgtpdo pkgconf@1.9.5%gcc
5xcetrv zlib-ng@2.1.4%gcc
54ik6mv hdf5@1.14.3%gcc
kd6xihn cmake@3.27.7%gcc
ijsmc3j curl@8.4.0%gcc
my64owh nghttp2@1.57.0%gcc
35j7wvr openssl@3.1.3%gcc
ct4al4u ca-certificates-mozilla@2023-05-30%gcc
dg34i2a perl@5.38.0%gcc
ku7makq berkeley-db@18.1.40%gcc
qqlh6as ncurses@6.4%gcc
znvoani gmake@4.4.1%gcc
l3z27rr mpich@4.1.2%gcc
cws3eft findutils@4.9.0%gcc
dyrsjed hwloc@2.9.1%gcc
voxng34 libfabric@1.19.0%gcc
af4bqq6 libpciaccess@0.17%gcc
rgag55h libtool@2.4.7%gcc
b7j7735 util-macros@1.19.3%gcc
67qoxbv libxml2@2.10.3%gcc
ivn4eq4 libiconv@1.17%gcc
axxqoeq xz@5.4.1%gcc
qrx4ymp yaksa@0.3%gcc
mnfnoa5 autoconf@2.69%gcc
d3cncgl automake@1.16.5%gcc
jnv5nut m4@1.4.19%gcc
ueheij3 diffutils@3.9%gcc
zuopqri libsigsegv@2.14%gcc
ybsi7tl python@3.11.6%gcc
4oz3kpf bzip2@1.0.8%gcc
demnlle expat@2.5.0%gcc
nrlj4tj libbsd@0.11.7%gcc
kg5ets2 libmd@1.0.4%gcc
m626hzw gdbm@1.23%gcc
y26lmlo gettext@0.22.3%gcc
vdb3ozo tar@1.34%gcc
catlxmo pigz@2.7%gcc
jkznmrm zstd@1.5.5%gcc
ra2t3ha libffi@3.4.4%gcc
hezcx7g libxcrypt@4.4.35%gcc
xxgqlmj readline@8.2%gcc
m2h5dly sqlite@3.43.2%gcc
thv4zdp util-linux-uuid@2.38.1%gcc
zjgtpdo pkgconf@1.9.5%gcc
5xcetrv zlib-ng@2.1.4%gcc
dyrsjed hwloc@2.9.1%gcc
znvoani gmake@4.4.1%gcc
af4bqq6 libpciaccess@0.17%gcc
rgag55h libtool@2.4.7%gcc
jnv5nut m4@1.4.19%gcc
ueheij3 diffutils@3.9%gcc
zuopqri libsigsegv@2.14%gcc
b7j7735 util-macros@1.19.3%gcc
67qoxbv libxml2@2.10.3%gcc
ivn4eq4 libiconv@1.17%gcc
axxqoeq xz@5.4.1%gcc
5xcetrv zlib-ng@2.1.4%gcc
qqlh6as ncurses@6.4%gcc
zjgtpdo pkgconf@1.9.5%gcc
tjiqlym krb5@1.20.1%gcc
lza42n2 bison@3.8.2%gcc
jnv5nut m4@1.4.19%gcc
zuopqri libsigsegv@2.14%gcc
dg34i2a perl@5.38.0%gcc
ku7makq berkeley-db@18.1.40%gcc
m626hzw gdbm@1.23%gcc
xxgqlmj readline@8.2%gcc
ueheij3 diffutils@3.9%gcc
ivn4eq4 libiconv@1.17%gcc
cws3eft findutils@4.9.0%gcc
y26lmlo gettext@0.22.3%gcc
4oz3kpf bzip2@1.0.8%gcc
67qoxbv libxml2@2.10.3%gcc
zjgtpdo pkgconf@1.9.5%gcc
qqlh6as ncurses@6.4%gcc
vdb3ozo tar@1.34%gcc
catlxmo pigz@2.7%gcc
jkznmrm zstd@1.5.5%gcc
axxqoeq xz@5.4.1%gcc
znvoani gmake@4.4.1%gcc
35j7wvr openssl@3.1.3%gcc
ct4al4u ca-certificates-mozilla@2023-05-30%gcc
5xcetrv zlib-ng@2.1.4%gcc
nrlj4tj libbsd@0.11.7%gcc
znvoani gmake@4.4.1%gcc
kg5ets2 libmd@1.0.4%gcc
s4kq4wo libedit@3.1-20210216%gcc
znvoani gmake@4.4.1%gcc
qqlh6as ncurses@6.4%gcc
zjgtpdo pkgconf@1.9.5%gcc
wpvxxka libevent@2.1.12%gcc
mnfnoa5 autoconf@2.69%gcc
jnv5nut m4@1.4.19%gcc
ueheij3 diffutils@3.9%gcc
ivn4eq4 libiconv@1.17%gcc
zuopqri libsigsegv@2.14%gcc
dg34i2a perl@5.38.0%gcc
ku7makq berkeley-db@18.1.40%gcc
4oz3kpf bzip2@1.0.8%gcc
m626hzw gdbm@1.23%gcc
xxgqlmj readline@8.2%gcc
qqlh6as ncurses@6.4%gcc
zjgtpdo pkgconf@1.9.5%gcc
d3cncgl automake@1.16.5%gcc
znvoani gmake@4.4.1%gcc
rgag55h libtool@2.4.7%gcc
35j7wvr openssl@3.1.3%gcc
ct4al4u ca-certificates-mozilla@2023-05-30%gcc
5xcetrv zlib-ng@2.1.4%gcc
voxng34 libfabric@1.19.0%gcc
znvoani gmake@4.4.1%gcc
ra2t3ha libffi@3.4.4%gcc
znvoani gmake@4.4.1%gcc
ivn4eq4 libiconv@1.17%gcc
znvoani gmake@4.4.1%gcc
kg5ets2 libmd@1.0.4%gcc
znvoani gmake@4.4.1%gcc
af4bqq6 libpciaccess@0.17%gcc
znvoani gmake@4.4.1%gcc
rgag55h libtool@2.4.7%gcc
jnv5nut m4@1.4.19%gcc
ueheij3 diffutils@3.9%gcc
ivn4eq4 libiconv@1.17%gcc
zuopqri libsigsegv@2.14%gcc
zjgtpdo pkgconf@1.9.5%gcc
b7j7735 util-macros@1.19.3%gcc
zuopqri libsigsegv@2.14%gcc
znvoani gmake@4.4.1%gcc
rgag55h libtool@2.4.7%gcc
znvoani gmake@4.4.1%gcc
jnv5nut m4@1.4.19%gcc
ueheij3 diffutils@3.9%gcc
ivn4eq4 libiconv@1.17%gcc
zuopqri libsigsegv@2.14%gcc
hezcx7g libxcrypt@4.4.35%gcc
znvoani gmake@4.4.1%gcc
dg34i2a perl@5.38.0%gcc
ku7makq berkeley-db@18.1.40%gcc
4oz3kpf bzip2@1.0.8%gcc
ueheij3 diffutils@3.9%gcc
ivn4eq4 libiconv@1.17%gcc
m626hzw gdbm@1.23%gcc
xxgqlmj readline@8.2%gcc
qqlh6as ncurses@6.4%gcc
zjgtpdo pkgconf@1.9.5%gcc
5xcetrv zlib-ng@2.1.4%gcc
67qoxbv libxml2@2.10.3%gcc
znvoani gmake@4.4.1%gcc
ivn4eq4 libiconv@1.17%gcc
zjgtpdo pkgconf@1.9.5%gcc
axxqoeq xz@5.4.1%gcc
5xcetrv zlib-ng@2.1.4%gcc
jnv5nut m4@1.4.19%gcc
ueheij3 diffutils@3.9%gcc
ivn4eq4 libiconv@1.17%gcc
znvoani gmake@4.4.1%gcc
zuopqri libsigsegv@2.14%gcc
l3z27rr mpich@4.1.2%gcc
cws3eft findutils@4.9.0%gcc
znvoani gmake@4.4.1%gcc
dyrsjed hwloc@2.9.1%gcc
qqlh6as ncurses@6.4%gcc
voxng34 libfabric@1.19.0%gcc
af4bqq6 libpciaccess@0.17%gcc
rgag55h libtool@2.4.7%gcc
b7j7735 util-macros@1.19.3%gcc
67qoxbv libxml2@2.10.3%gcc
ivn4eq4 libiconv@1.17%gcc
axxqoeq xz@5.4.1%gcc
5xcetrv zlib-ng@2.1.4%gcc
zjgtpdo pkgconf@1.9.5%gcc
qrx4ymp yaksa@0.3%gcc
mnfnoa5 autoconf@2.69%gcc
dg34i2a perl@5.38.0%gcc
ku7makq berkeley-db@18.1.40%gcc
d3cncgl automake@1.16.5%gcc
jnv5nut m4@1.4.19%gcc
ueheij3 diffutils@3.9%gcc
zuopqri libsigsegv@2.14%gcc
ybsi7tl python@3.11.6%gcc
4oz3kpf bzip2@1.0.8%gcc
demnlle expat@2.5.0%gcc
nrlj4tj libbsd@0.11.7%gcc
kg5ets2 libmd@1.0.4%gcc
m626hzw gdbm@1.23%gcc
y26lmlo gettext@0.22.3%gcc
vdb3ozo tar@1.34%gcc
catlxmo pigz@2.7%gcc
jkznmrm zstd@1.5.5%gcc
ra2t3ha libffi@3.4.4%gcc
hezcx7g libxcrypt@4.4.35%gcc
35j7wvr openssl@3.1.3%gcc
ct4al4u ca-certificates-mozilla@2023-05-30%gcc
xxgqlmj readline@8.2%gcc
m2h5dly sqlite@3.43.2%gcc
thv4zdp util-linux-uuid@2.38.1%gcc
qqlh6as ncurses@6.4%gcc
znvoani gmake@4.4.1%gcc
zjgtpdo pkgconf@1.9.5%gcc
my64owh nghttp2@1.57.0%gcc
znvoani gmake@4.4.1%gcc
zjgtpdo pkgconf@1.9.5%gcc
mbwdizy numactl@2.0.14%gcc
mnfnoa5 autoconf@2.69%gcc
dg34i2a perl@5.38.0%gcc
ku7makq berkeley-db@18.1.40%gcc
4oz3kpf bzip2@1.0.8%gcc
m626hzw gdbm@1.23%gcc
xxgqlmj readline@8.2%gcc
qqlh6as ncurses@6.4%gcc
zjgtpdo pkgconf@1.9.5%gcc
5xcetrv zlib-ng@2.1.4%gcc
d3cncgl automake@1.16.5%gcc
znvoani gmake@4.4.1%gcc
rgag55h libtool@2.4.7%gcc
jnv5nut m4@1.4.19%gcc
ueheij3 diffutils@3.9%gcc
ivn4eq4 libiconv@1.17%gcc
zuopqri libsigsegv@2.14%gcc
z4iqm7n openmpi@4.1.6%gcc
znvoani gmake@4.4.1%gcc
dyrsjed hwloc@2.9.1%gcc
af4bqq6 libpciaccess@0.17%gcc
b7j7735 util-macros@1.19.3%gcc
67qoxbv libxml2@2.10.3%gcc
ivn4eq4 libiconv@1.17%gcc
axxqoeq xz@5.4.1%gcc
qqlh6as ncurses@6.4%gcc
mbwdizy numactl@2.0.14%gcc
mnfnoa5 autoconf@2.69%gcc
d3cncgl automake@1.16.5%gcc
rgag55h libtool@2.4.7%gcc
jnv5nut m4@1.4.19%gcc
ueheij3 diffutils@3.9%gcc
zuopqri libsigsegv@2.14%gcc
zjwxy3z openssh@9.5p1%gcc
tjiqlym krb5@1.20.1%gcc
lza42n2 bison@3.8.2%gcc
cws3eft findutils@4.9.0%gcc
y26lmlo gettext@0.22.3%gcc
vdb3ozo tar@1.34%gcc
catlxmo pigz@2.7%gcc
jkznmrm zstd@1.5.5%gcc
s4kq4wo libedit@3.1-20210216%gcc
hezcx7g libxcrypt@4.4.35%gcc
35j7wvr openssl@3.1.3%gcc
ct4al4u ca-certificates-mozilla@2023-05-30%gcc
dg34i2a perl@5.38.0%gcc
ku7makq berkeley-db@18.1.40%gcc
4oz3kpf bzip2@1.0.8%gcc
m626hzw gdbm@1.23%gcc
xxgqlmj readline@8.2%gcc
zjgtpdo pkgconf@1.9.5%gcc
fhkyvm3 pmix@5.0.1%gcc
wpvxxka libevent@2.1.12%gcc
5xcetrv zlib-ng@2.1.4%gcc
zjwxy3z openssh@9.5p1%gcc
znvoani gmake@4.4.1%gcc
tjiqlym krb5@1.20.1%gcc
lza42n2 bison@3.8.2%gcc
jnv5nut m4@1.4.19%gcc
zuopqri libsigsegv@2.14%gcc
ueheij3 diffutils@3.9%gcc
ivn4eq4 libiconv@1.17%gcc
cws3eft findutils@4.9.0%gcc
y26lmlo gettext@0.22.3%gcc
4oz3kpf bzip2@1.0.8%gcc
67qoxbv libxml2@2.10.3%gcc
vdb3ozo tar@1.34%gcc
catlxmo pigz@2.7%gcc
jkznmrm zstd@1.5.5%gcc
axxqoeq xz@5.4.1%gcc
s4kq4wo libedit@3.1-20210216%gcc
zjgtpdo pkgconf@1.9.5%gcc
hezcx7g libxcrypt@4.4.35%gcc
dg34i2a perl@5.38.0%gcc
ku7makq berkeley-db@18.1.40%gcc
m626hzw gdbm@1.23%gcc
xxgqlmj readline@8.2%gcc
qqlh6as ncurses@6.4%gcc
35j7wvr openssl@3.1.3%gcc
ct4al4u ca-certificates-mozilla@2023-05-30%gcc
5xcetrv zlib-ng@2.1.4%gcc
35j7wvr openssl@3.1.3%gcc
ct4al4u ca-certificates-mozilla@2023-05-30%gcc
dg34i2a perl@5.38.0%gcc
ku7makq berkeley-db@18.1.40%gcc
4oz3kpf bzip2@1.0.8%gcc
ueheij3 diffutils@3.9%gcc
ivn4eq4 libiconv@1.17%gcc
m626hzw gdbm@1.23%gcc
xxgqlmj readline@8.2%gcc
qqlh6as ncurses@6.4%gcc
zjgtpdo pkgconf@1.9.5%gcc
5xcetrv zlib-ng@2.1.4%gcc
znvoani gmake@4.4.1%gcc
dg34i2a perl@5.38.0%gcc
ku7makq berkeley-db@18.1.40%gcc
znvoani gmake@4.4.1%gcc
4oz3kpf bzip2@1.0.8%gcc
ueheij3 diffutils@3.9%gcc
ivn4eq4 libiconv@1.17%gcc
m626hzw gdbm@1.23%gcc
xxgqlmj readline@8.2%gcc
qqlh6as ncurses@6.4%gcc
zjgtpdo pkgconf@1.9.5%gcc
5xcetrv zlib-ng@2.1.4%gcc
catlxmo pigz@2.7%gcc
znvoani gmake@4.4.1%gcc
5xcetrv zlib-ng@2.1.4%gcc
zjgtpdo pkgconf@1.9.5%gcc
znvoani gmake@4.4.1%gcc
fhkyvm3 pmix@5.0.1%gcc
znvoani gmake@4.4.1%gcc
dyrsjed hwloc@2.9.1%gcc
af4bqq6 libpciaccess@0.17%gcc
b7j7735 util-macros@1.19.3%gcc
67qoxbv libxml2@2.10.3%gcc
ivn4eq4 libiconv@1.17%gcc
axxqoeq xz@5.4.1%gcc
5xcetrv zlib-ng@2.1.4%gcc
qqlh6as ncurses@6.4%gcc
wpvxxka libevent@2.1.12%gcc
mnfnoa5 autoconf@2.69%gcc
jnv5nut m4@1.4.19%gcc
ueheij3 diffutils@3.9%gcc
zuopqri libsigsegv@2.14%gcc
dg34i2a perl@5.38.0%gcc
ku7makq berkeley-db@18.1.40%gcc
4oz3kpf bzip2@1.0.8%gcc
m626hzw gdbm@1.23%gcc
xxgqlmj readline@8.2%gcc
d3cncgl automake@1.16.5%gcc
rgag55h libtool@2.4.7%gcc
35j7wvr openssl@3.1.3%gcc
ct4al4u ca-certificates-mozilla@2023-05-30%gcc
zjgtpdo pkgconf@1.9.5%gcc
ybsi7tl python@3.11.6%gcc
4oz3kpf bzip2@1.0.8%gcc
ueheij3 diffutils@3.9%gcc
demnlle expat@2.5.0%gcc
znvoani gmake@4.4.1%gcc
nrlj4tj libbsd@0.11.7%gcc
kg5ets2 libmd@1.0.4%gcc
m626hzw gdbm@1.23%gcc
y26lmlo gettext@0.22.3%gcc
ivn4eq4 libiconv@1.17%gcc
67qoxbv libxml2@2.10.3%gcc
vdb3ozo tar@1.34%gcc
catlxmo pigz@2.7%gcc
jkznmrm zstd@1.5.5%gcc
ra2t3ha libffi@3.4.4%gcc
hezcx7g libxcrypt@4.4.35%gcc
dg34i2a perl@5.38.0%gcc
ku7makq berkeley-db@18.1.40%gcc
qqlh6as ncurses@6.4%gcc
35j7wvr openssl@3.1.3%gcc
ct4al4u ca-certificates-mozilla@2023-05-30%gcc
zjgtpdo pkgconf@1.9.5%gcc
xxgqlmj readline@8.2%gcc
m2h5dly sqlite@3.43.2%gcc
thv4zdp util-linux-uuid@2.38.1%gcc
axxqoeq xz@5.4.1%gcc
5xcetrv zlib-ng@2.1.4%gcc
xxgqlmj readline@8.2%gcc
znvoani gmake@4.4.1%gcc
qqlh6as ncurses@6.4%gcc
zjgtpdo pkgconf@1.9.5%gcc
m2h5dly sqlite@3.43.2%gcc
znvoani gmake@4.4.1%gcc
xxgqlmj readline@8.2%gcc
qqlh6as ncurses@6.4%gcc
zjgtpdo pkgconf@1.9.5%gcc
5xcetrv zlib-ng@2.1.4%gcc
vdb3ozo tar@1.34%gcc
4oz3kpf bzip2@1.0.8%gcc
ueheij3 diffutils@3.9%gcc
znvoani gmake@4.4.1%gcc
ivn4eq4 libiconv@1.17%gcc
catlxmo pigz@2.7%gcc
5xcetrv zlib-ng@2.1.4%gcc
axxqoeq xz@5.4.1%gcc
jkznmrm zstd@1.5.5%gcc
qfb3pvm tcl@8.6.12%gcc
znvoani gmake@4.4.1%gcc
npuw4up zlib-ng@2.0.7%gcc cflags="-O3"
tt2hv6r tcl@8.6.12%gcc
znvoani gmake@4.4.1%gcc
5xcetrv zlib-ng@2.1.4%gcc
thv4zdp util-linux-uuid@2.38.1%gcc
znvoani gmake@4.4.1%gcc
zjgtpdo pkgconf@1.9.5%gcc
b7j7735 util-macros@1.19.3%gcc
znvoani gmake@4.4.1%gcc
axxqoeq xz@5.4.1%gcc
znvoani gmake@4.4.1%gcc
qrx4ymp yaksa@0.3%gcc
mnfnoa5 autoconf@2.69%gcc
dg34i2a perl@5.38.0%gcc
ku7makq berkeley-db@18.1.40%gcc
d3cncgl automake@1.16.5%gcc
znvoani gmake@4.4.1%gcc
rgag55h libtool@2.4.7%gcc
jnv5nut m4@1.4.19%gcc
ueheij3 diffutils@3.9%gcc
ivn4eq4 libiconv@1.17%gcc
zuopqri libsigsegv@2.14%gcc
ybsi7tl python@3.11.6%gcc
4oz3kpf bzip2@1.0.8%gcc
demnlle expat@2.5.0%gcc
nrlj4tj libbsd@0.11.7%gcc
kg5ets2 libmd@1.0.4%gcc
m626hzw gdbm@1.23%gcc
y26lmlo gettext@0.22.3%gcc
67qoxbv libxml2@2.10.3%gcc
vdb3ozo tar@1.34%gcc
catlxmo pigz@2.7%gcc
jkznmrm zstd@1.5.5%gcc
ra2t3ha libffi@3.4.4%gcc
hezcx7g libxcrypt@4.4.35%gcc
qqlh6as ncurses@6.4%gcc
35j7wvr openssl@3.1.3%gcc
ct4al4u ca-certificates-mozilla@2023-05-30%gcc
zjgtpdo pkgconf@1.9.5%gcc
xxgqlmj readline@8.2%gcc
m2h5dly sqlite@3.43.2%gcc
thv4zdp util-linux-uuid@2.38.1%gcc
axxqoeq xz@5.4.1%gcc
5xcetrv zlib-ng@2.1.4%gcc
ffnsgi6 zlib-ng@2.0.7%gcc
znvoani gmake@4.4.1%gcc
npuw4up zlib-ng@2.0.7%gcc cflags="-O3"
znvoani gmake@4.4.1%gcc
5xcetrv zlib-ng@2.1.4%gcc
znvoani gmake@4.4.1%gcc
jkznmrm zstd@1.5.5%gcc
znvoani gmake@4.4.1%gcc
==> 63 installed packages
Spack models the dependencies of packages as a directed acyclic graph
(DAG). The spack find -d command shows the tree representation of
that graph. We can also use the spack graph command to view the entire
DAG as a graph.
$ spack graph hdf5+hl+mpi ^mpich
o hdf5@1.14.3/54ik6mv
|\
| |\
| | |\
| | | |\
| | o | | mpich@4.1.2/l3z27rr
| |/| | |
| | |\| |
| | |\ \ \
| | | |\ \ \
| | | | |\ \ \
| | | | | |\ \ \
| | | | | | |\ \ \
| | o | | | | | | | yaksa@0.3/qrx4ymp
| | |\ \ \ \ \ \ \ \
| | | |\ \ \ \ \ \ \ \
| | | | |\ \ \ \ \ \ \ \
| | | | | |\ \ \ \ \ \ \ \
| | | | | | |_|_|_|_|_|/ /
| | | | | |/| | | | | | |
| | | | | | |\ \ \ \ \ \ \
| | o | | | | | | | | | | | python@3.11.6/ybsi7tl
| |/| | | | | | | | | | | |
|/|/| | | | | | | | | | | |
| | |\ \ \ \ \ \ \ \ \ \ \ \
| | | |\ \ \ \ \ \ \ \ \ \ \ \
| | | | |\ \ \ \ \ \ \ \ \ \ \ \
| | | | | |\ \ \ \ \ \ \ \ \ \ \ \
| | | | | | |\ \ \ \ \ \ \ \ \ \ \ \
| | | | | | | |\ \ \ \ \ \ \ \ \ \ \ \
| | | | | | | | |\ \ \ \ \ \ \ \ \ \ \ \
| | | | | | | | | |\ \ \ \ \ \ \ \ \ \ \ \
| | | | | | | | | | |\ \ \ \ \ \ \ \ \ \ \ \
| | | | | | | | | | | |\ \ \ \ \ \ \ \ \ \ \ \
| | | | | | | | | | | | |\ \ \ \ \ \ \ \ \ \ \ \
| | | o | | | | | | | | | | | | | | | | | | | | | util-linux-uuid@2.38.1/thv4zdp
| | |/| | | | | | | | | | | | | | | | | | | | | |
| |/| | | | | | | | | | | | | | | | | | | | | | |
| | | | |_|_|_|_|_|_|_|_|_|_|_|/ / / / / / / / /
| | | |/| | | | | | | | | | | | | | | | | | | |
| | | | o | | | | | | | | | | | | | | | | | | | sqlite@3.43.2/m2h5dly
| |_|_|/| | | | | | | | | | | | | | | | | | | |
|/| | |/| | | | | | | | | | | | | | | | | | | |
| | | | |/ / / / / / / / / / / / / / / / / / /
| | | | | | | o | | | | | | | | | | | | | | | libxcrypt@4.4.35/hezcx7g
| | | | |_|_|/| | | | | | | | | | | | | | | |
| | | |/| | | | | | | | | | | | | | | | | | |
| | | | | | | | o | | | | | | | | | | | | | | libffi@3.4.4/ra2t3ha
| | | | |_|_|_|/ / / / / / / / / / / / / / /
| | | |/| | | | | | | | | | | | | | | | | |
| | | | | | | | o | | | | | | | | | | | | | gettext@0.22.3/y26lmlo
| | | |_|_|_|_|/| | | | | | | | | | | | | |
| | |/| |_|_|_|/| | | | | | | | | | | | | |
| | | |/| | | |/| | | | | | | | | | | | | |
| | | | | | |/| | | | | | | | | | | | | | |
| | | | | | | | |\ \ \ \ \ \ \ \ \ \ \ \ \ \
| | | | | | | | | |\ \ \ \ \ \ \ \ \ \ \ \ \ \
| | | | | | | | | | |_|_|_|_|_|_|_|/ / / / / /
| | | | | | | | | |/| | | | | | | | | | | | |
| | | | | | | | | | |\ \ \ \ \ \ \ \ \ \ \ \ \
| | | | | | | | | | | | |_|/ / / / / / / / / /
| | | | | | | | | | | |/| | | | | | | | | | |
| | | | | | | | o | | | | | | | | | | | | | | tar@1.34/vdb3ozo
| | | |_|_|_|_|/| | | | | | | | | | | | | | |
| | |/| |_|_|_|/| | | | | | | | | | | | | | |
| | | |/| | | | | | | | | | | | | | | | | | |
| | | | | | | | |\ \ \ \ \ \ \ \ \ \ \ \ \ \ \
| | | | | | | | | |\ \ \ \ \ \ \ \ \ \ \ \ \ \ \
| | | | | | | | | | |\ \ \ \ \ \ \ \ \ \ \ \ \ \ \
| | | | | | | | | | | |_|/ / / / / / / / / / / / /
| | | | | | | | | | |/| | | | | | | | | | | | | |
| | | | | | | | | | | |/ / / / / / / / / / / / /
| | | | | | | | o | | | | | | | | | | | | | | | zstd@1.5.5/jkznmrm
| | | | |_|_|_|/ / / / / / / / / / / / / / / /
| | | |/| | | | | | | | | | | | | | | | | | |
| | | | | | | | o | | | | | | | | | | | | | | pigz@2.7/catlxmo
| |_|_|_|_|_|_|/| | | | | | | | | | | | | | |
|/| | | |_|_|_|/ / / / / / / / / / / / / / /
| | | |/| | | | | | | | | | | | | | | | | |
| | | | | | | | | | | | o | | | | | | | | | expat@2.5.0/demnlle
| | | | |_|_|_|_|_|_|_|/| | | | | | | | | |
| | | |/| | | | | | | | | | | | | | | | | |
| | | | | | | | | | | | o | | | | | | | | | libbsd@0.11.7/nrlj4tj
| | | | |_|_|_|_|_|_|_|/| | | | | | | | | |
| | | |/| | | | | | | | | | | | | | | | | |
| | | | | | | | | | | | o | | | | | | | | | libmd@1.0.4/kg5ets2
| | | | |_|_|_|_|_|_|_|/ / / / / / / / / /
| | | |/| | | | | | | | | | | | | | | | |
| | | | | | | | | | | | | | o | | | | | | automake@1.16.5/d3cncgl
| | | | |_|_|_|_|_|_|_|_|_|/| | | | | | |
| | | |/| | | | |_|_|_|_|_|/| | | | | | |
| | | | | | | |/| | | | | | | | | | | | |
| | | | | | | | | | | | | | |/ / / / / /
| | | | | | | | | | | | | | o | | | | | autoconf@2.69/mnfnoa5
| | | | |_|_|_|_|_|_|_|_|_|/| | | | | |
| | | |/| | | | |_|_|_|_|_|/| | | | | |
| | | | | | | |/| | | | | |/ / / / / /
| | | | | | | | | | | | |/| | | | | |
| | | | | | | | | | | | | | | o | | | libfabric@1.19.0/voxng34
| | | | |_|_|_|_|_|_|_|_|_|_|/ / / /
| | | |/| | | | | | | | | | | | | |
| | | | | | | | | | | | | | | o | | hwloc@2.9.1/dyrsjed
| | |_|_|_|_|_|_|_|_|_|_|_|_|/| | |
| |/| | |_|_|_|_|_|_|_|_|_|_|/| | |
| | | |/| | | |_|_|_|_|_|_|_|/| | |
| | | | | | |/| | | | |_|_|_|/| | |
| | | | | | | | | | |/| | | |/ / /
| | | | | | | | | | o | | | | | | libxml2@2.10.3/67qoxbv
| |_|_|_|_|_|_|_|_|/| | | | | | |
|/| |_|_|_|_|_|_|_|/| | | | | | |
| |/| |_|_|_|_|_|_|/| | | | | | |
| | |/| |_|_|_|_|_|/| | | | | | |
| | | |/| | | | | |/ / / / / / /
| | | | | | | | |/| | | | | | |
| | o | | | | | | | | | | | | | xz@5.4.1/axxqoeq
| | |/ / / / / / / / / / / / /
| | | | | | | | | | | | o | | libpciaccess@0.17/af4bqq6
| | |_|_|_|_|_|_|_|_|_|/| | |
| |/| |_|_|_|_|_|_|_|_|/| | |
| | |/| | | | | | | | |/| | |
| | | | | | | | | | | | o | | util-macros@1.19.3/b7j7735
| | | |_|_|_|_|_|_|_|_|/ / /
| | |/| | | | | | | | | | |
| | | | | | | | | | | o | | libtool@2.4.7/rgag55h
| | | |_|_|_|_|_|_|_|/| | |
| | |/| | | | | | | |/ / /
| | | | | | | | | | o | | m4@1.4.19/jnv5nut
| | | |_|_|_|_|_|_|/| | |
| | |/| | | | | | | | | |
| | | | | | | | | | |\ \ \
| | | | | | | | | | o | | | libsigsegv@2.14/zuopqri
| | | |_|_|_|_|_|_|/ / / /
| | |/| | | | | | | | | |
| | | | | | | | | | | o | findutils@4.9.0/cws3eft
| | | |_|_|_|_|_|_|_|/ /
| | |/| | | | | | | | |
| | | | | | | | | | | o cmake@3.27.7/kd6xihn
| |_|_|_|_|_|_|_|_|_|/|
|/| | | | | |_|_|_|_|/|
| | | | | |/| | | | | |
| | | | | | | | | | | o curl@8.4.0/ijsmc3j
| |_|_|_|_|_|_|_|_|_|/|
|/| |_|_|_|_|_|_|_|_|/|
| |/| |_|_|_|_|_|_|_|/|
| | |/| | |_|_|_|_|_|/|
| | | | |/| | | | | | |
| | | | o | | | | | | | openssl@3.1.3/35j7wvr
| |_|_|/| | | | | | | |
|/| | | | | | | | | | |
| | | | |\ \ \ \ \ \ \ \
| | | | | |_|/ / / / / /
| | | | |/| | | | | | |
| | | | o | | | | | | | perl@5.38.0/dg34i2a
| |_|_|/| | | | | | | |
|/| | | | | | | | | | |
| | | | |\ \ \ \ \ \ \ \
| | | | | |_|_|_|_|/ / /
| | | | |/| | | | | | |
| | | | | |\ \ \ \ \ \ \
| | | | | | |_|_|_|/ / /
| | | | | |/| | | | | |
o | | | | | | | | | | | zlib-ng@2.1.4/5xcetrv
| |/ / / / / / / / / /
|/| | | | | | | | | |
| | | o | | | | | | | gdbm@1.23/m626hzw
| |_|/| | | | | | | |
|/| |/ / / / / / / /
| | o | | | | | | | readline@8.2/xxgqlmj
| |/| | | | | | | |
|/| | | | | | | | |
| | | |_|_|/ / / /
| | |/| | | | | |
| | o | | | | | | ncurses@6.4/qqlh6as
| |/| | | | | | |
|/|/ / / / / / /
| | o | | | | | bzip2@1.0.8/4oz3kpf
| | | |_|_|/ /
| | |/| | | |
| | o | | | | diffutils@3.9/ueheij3
| |/| | | | |
|/| | | | | |
| | | |_|/ /
| | |/| | |
| | o | | | libiconv@1.17/ivn4eq4
| |/ / / /
|/| | | |
| | o | | berkeley-db@18.1.40/ku7makq
| |/ / /
|/| | |
| | o | ca-certificates-mozilla@2023-05-30/ct4al4u
| | /
| | o nghttp2@1.57.0/my64owh
| |/|
|/|/
| o pkgconf@1.9.5/zjgtpdo
|/
o gmake@4.4.1/znvoani
HDF5 is more complicated than our basic example of zlib-ng and Tcl, but it’s still within the realm of software that an experienced HPC user could reasonably expect to manually install given a bit of time. Now let’s look at an even more complicated package.
$ spack install trilinos
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/nghttp2-1.57.0-my64owhngq5r4nl2lpysh2skvrq3nlo5
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/zlib-ng-2.1.4-5xcetrvs3fzd7k27dw5duyxitnsy4uvh
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/ncurses-6.4-qqlh6asufg6vhjnkbhwxl3jmocyolykt
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/gmake-4.4.1-znvoaniggvauzxv4yobchqt4g7tyjuc7
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/bzip2-1.0.8-4oz3kpfibmlvfizzivudj7pnzm2w7ce7
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/openssl-3.1.3-35j7wvrf3jovxokjkzdrpv265sfrjwga
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/pigz-2.7-catlxmodt7sirns2di5pod576omq32hk
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/berkeley-db-18.1.40-ku7makqmto7yrue2y3duu2phqtnvqd26
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/libpciaccess-0.17-af4bqq6hwe23ojn7i3o2n7ws2b7wu64m
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/numactl-2.0.14-mbwdizyinycylldk4lrjvq2y474cd5bk
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/xz-5.4.1-axxqoeqv4lckdxrkvdp6f376ndmade4c
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/libiconv-1.17-ivn4eq42mmvco5l3drcxjzbmpto5nfi2
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/readline-8.2-xxgqlmjyegrwwuq2pq4zaq7y6qojp3mz
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/libedit-3.1-20210216-s4kq4wo6ii3vt3s354agguqm462yu32q
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/libxcrypt-4.4.35-hezcx7ggdisbf6oqol5ucfch7emlggqk
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/zstd-1.5.5-jkznmrmqdgtpzvs42qxljrjs6m6f6aho
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/libevent-2.1.12-wpvxxkafb3j7uc465iekvpyhew3brhl7
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/curl-8.4.0-ijsmc3jx2cjmdy2svodqqkeimkooheod
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/libxml2-2.10.3-67qoxbv3pyyep745wytvlgnnosn6pwnr
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/gdbm-1.23-m626hzwxamau2a4cbu2hptq477qnufc4
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/tar-1.34-vdb3ozocdu73c4gl45gnzcjgscfye6mg
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/cmake-3.27.7-kd6xihnhlzyfwafeilow6t2mvolyryor
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/hwloc-2.9.1-dyrsjedv3fxwdi3sutxieq2rcz4etdib
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/perl-5.38.0-dg34i2ae7omo77k6ntqkb6zi76gmeava
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/gettext-0.22.3-y26lmloj3u6romzd6j3xdfiib7gnkbga
==> Installing kokkos-4.1.00-66qtu3ee26xv4pfrumw6t3d7o7gxqq6f [26/32]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-kokkos-4.1.00-66qtu3ee26xv4pfrumw6t3d7o7gxqq6f.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/kokkos-4.1.00/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-kokkos-4.1.00-66qtu3ee26xv4pfrumw6t3d7o7gxqq6f.spack
==> Extracting kokkos-4.1.00-66qtu3ee26xv4pfrumw6t3d7o7gxqq6f from binary cache
==> kokkos: Successfully installed kokkos-4.1.00-66qtu3ee26xv4pfrumw6t3d7o7gxqq6f
Search: 0.00s. Fetch: 0.09s. Install: 0.17s. Extract: 0.15s. Relocate: 0.01s. Total: 0.26s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/kokkos-4.1.00-66qtu3ee26xv4pfrumw6t3d7o7gxqq6f
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/pmix-5.0.1-fhkyvm3nsv5cjxhfszdx2y3rieh274vn
==> Installing openblas-0.3.24-ksqcytobbocswt2qcw3q3tgmeu4acph6 [28/32]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-openblas-0.3.24-ksqcytobbocswt2qcw3q3tgmeu4acph6.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/openblas-0.3.24/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-openblas-0.3.24-ksqcytobbocswt2qcw3q3tgmeu4acph6.spack
==> Extracting openblas-0.3.24-ksqcytobbocswt2qcw3q3tgmeu4acph6 from binary cache
==> openblas: Successfully installed openblas-0.3.24-ksqcytobbocswt2qcw3q3tgmeu4acph6
Search: 0.00s. Fetch: 0.04s. Install: 0.68s. Extract: 0.63s. Relocate: 0.05s. Total: 0.73s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/openblas-0.3.24-ksqcytobbocswt2qcw3q3tgmeu4acph6
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/krb5-1.20.1-tjiqlymlbmjxyyvwlkumu4qq65nuqr3w
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/openssh-9.5p1-zjwxy3znkrc3yslkm3eoyewet5bxacjc
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/openmpi-4.1.6-z4iqm7nipxsdam3chio7r74ob3cznoof
==> Installing trilinos-14.4.0-46nzgyjf7brdinl7hi5iyyinm6au54mz [32/32]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-trilinos-14.4.0-46nzgyjf7brdinl7hi5iyyinm6au54mz.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/trilinos-14.4.0/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-trilinos-14.4.0-46nzgyjf7brdinl7hi5iyyinm6au54mz.spack
==> Extracting trilinos-14.4.0-46nzgyjf7brdinl7hi5iyyinm6au54mz from binary cache
==> trilinos: Successfully installed trilinos-14.4.0-46nzgyjf7brdinl7hi5iyyinm6au54mz
Search: 0.00s. Fetch: 0.05s. Install: 1.73s. Extract: 1.60s. Relocate: 0.12s. Total: 1.78s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/trilinos-14.4.0-46nzgyjf7brdinl7hi5iyyinm6au54mz
Now we’re starting to see the power of Spack. Trilinos in its default configuration has 23 top level dependencies, many of which have dependencies of their own. Installing more complex packages can take days or weeks even for an experienced user. Although we’ve done a binary installation for the tutorial, a source installation of Trilinos using Spack takes about 3 hours (depending on the system), but only 20 seconds of programmer time.
Spack manages consistency of the entire DAG. Every MPI dependency will be satisfied by the same configuration of MPI, etc. If we install Trilinos again specifying a dependency on our previous HDF5 built with MPICH:
$ spack install trilinos +hdf5 ^hdf5+hl+mpi ^mpich
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/nghttp2-1.57.0-my64owhngq5r4nl2lpysh2skvrq3nlo5
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/zlib-ng-2.1.4-5xcetrvs3fzd7k27dw5duyxitnsy4uvh
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/ncurses-6.4-qqlh6asufg6vhjnkbhwxl3jmocyolykt
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/gmake-4.4.1-znvoaniggvauzxv4yobchqt4g7tyjuc7
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/openssl-3.1.3-35j7wvrf3jovxokjkzdrpv265sfrjwga
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/libpciaccess-0.17-af4bqq6hwe23ojn7i3o2n7ws2b7wu64m
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/yaksa-0.3-qrx4ymppmpsvloibdgwgao722aoaymz4
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/openblas-0.3.24-ksqcytobbocswt2qcw3q3tgmeu4acph6
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/libfabric-1.19.0-voxng34f553p4suxv7cdrbeyk2li3nje
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/kokkos-4.1.00-66qtu3ee26xv4pfrumw6t3d7o7gxqq6f
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/libiconv-1.17-ivn4eq42mmvco5l3drcxjzbmpto5nfi2
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/xz-5.4.1-axxqoeqv4lckdxrkvdp6f376ndmade4c
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/pkgconf-1.9.5-zjgtpdofa5acoyfs62cczvdj3gjngy3y
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/libxml2-2.10.3-67qoxbv3pyyep745wytvlgnnosn6pwnr
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/curl-8.4.0-ijsmc3jx2cjmdy2svodqqkeimkooheod
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/hwloc-2.9.1-dyrsjedv3fxwdi3sutxieq2rcz4etdib
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/cmake-3.27.7-kd6xihnhlzyfwafeilow6t2mvolyryor
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/mpich-4.1.2-l3z27rrcuod3irlyhu4nehjxridjaeam
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/hdf5-1.14.3-54ik6mvay2cwhoznzuhkud57dqeat7mj
==> Installing trilinos-14.4.0-gnrf5rihwn3bvmc2sdmgpdrqbgdp2xwt [20/20]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-trilinos-14.4.0-gnrf5rihwn3bvmc2sdmgpdrqbgdp2xwt.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/trilinos-14.4.0/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-trilinos-14.4.0-gnrf5rihwn3bvmc2sdmgpdrqbgdp2xwt.spack
==> Extracting trilinos-14.4.0-gnrf5rihwn3bvmc2sdmgpdrqbgdp2xwt from binary cache
==> trilinos: Successfully installed trilinos-14.4.0-gnrf5rihwn3bvmc2sdmgpdrqbgdp2xwt
Search: 0.00s. Fetch: 0.14s. Install: 1.72s. Extract: 1.60s. Relocate: 0.10s. Total: 1.85s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/trilinos-14.4.0-gnrf5rihwn3bvmc2sdmgpdrqbgdp2xwt
We see that every package in the Trilinos DAG that depends on MPI now uses MPICH.
$ spack find -d trilinos
-- linux-ubuntu22.04-x86_64_v3 / gcc@11.4.0 ---------------------
trilinos@14.4.0
cmake@3.27.7
curl@8.4.0
nghttp2@1.57.0
openssl@3.1.3
ca-certificates-mozilla@2023-05-30
ncurses@6.4
zlib-ng@2.1.4
gmake@4.4.1
hwloc@2.9.1
libpciaccess@0.17
libtool@2.4.7
util-macros@1.19.3
libxml2@2.10.3
libiconv@1.17
xz@5.4.1
pkgconf@1.9.5
kokkos@4.1.00
openblas@0.3.24
perl@5.38.0
berkeley-db@18.1.40
bzip2@1.0.8
diffutils@3.9
gdbm@1.23
readline@8.2
openmpi@4.1.6
numactl@2.0.14
autoconf@2.69
automake@1.16.5
m4@1.4.19
libsigsegv@2.14
openssh@9.5p1
krb5@1.20.1
bison@3.8.2
findutils@4.9.0
gettext@0.22.3
tar@1.34
pigz@2.7
zstd@1.5.5
libedit@3.1-20210216
libxcrypt@4.4.35
pmix@5.0.1
libevent@2.1.12
trilinos@14.4.0
cmake@3.27.7
curl@8.4.0
nghttp2@1.57.0
openssl@3.1.3
ca-certificates-mozilla@2023-05-30
ncurses@6.4
zlib-ng@2.1.4
gmake@4.4.1
hdf5@1.14.3
pkgconf@1.9.5
hwloc@2.9.1
libpciaccess@0.17
libtool@2.4.7
util-macros@1.19.3
libxml2@2.10.3
libiconv@1.17
xz@5.4.1
kokkos@4.1.00
mpich@4.1.2
findutils@4.9.0
libfabric@1.19.0
yaksa@0.3
autoconf@2.69
automake@1.16.5
m4@1.4.19
diffutils@3.9
libsigsegv@2.14
python@3.11.6
expat@2.5.0
libbsd@0.11.7
libmd@1.0.4
gettext@0.22.3
tar@1.34
pigz@2.7
zstd@1.5.5
libffi@3.4.4
libxcrypt@4.4.35
readline@8.2
sqlite@3.43.2
util-linux-uuid@2.38.1
openblas@0.3.24
perl@5.38.0
berkeley-db@18.1.40
bzip2@1.0.8
gdbm@1.23
==> 2 installed packages
As we discussed before, the spack find -d command shows the
dependency information as a tree. While that is often sufficient, many
complicated packages, including Trilinos, have dependencies that
cannot be fully represented as a tree. Again, the spack graph
command shows the full DAG of the dependency information.
$ spack graph trilinos
o trilinos@14.4.0/46nzgyj
|\
| |\
| | |\
| | | |\
| | | | |\
o | | | | | openmpi@4.1.6/z4iqm7n
|\ \ \ \ \ \
| |\ \ \ \ \ \
| | |\ \ \ \ \ \
| | | |\ \ \ \ \ \
| | | | |\ \ \ \ \ \
| | | | | |\ \ \ \ \ \
| | | | | | |\ \ \ \ \ \
| | | | | | | |_|_|/ / /
| | | | | | |/| | | | |
| | | | | | | | |/ / /
| | | | | | | |/| | |
| o | | | | | | | | | pmix@5.0.1/fhkyvm3
| |\| | | | | | | | |
| |\ \ \ \ \ \ \ \ \ \
| | |\ \ \ \ \ \ \ \ \ \
| | | |_|_|_|_|/ / / / /
| | |/| | | | | | | | |
| | | | |_|_|/ / / / /
| | | |/| | | | | | |
| o | | | | | | | | | libevent@2.1.12/wpvxxka
| |\ \ \ \ \ \ \ \ \ \
| | |\ \ \ \ \ \ \ \ \ \
| | | |\ \ \ \ \ \ \ \ \ \
| | | | |_|/ / / / / / / /
| | | |/| | | | | | | | |
| | | | |\ \ \ \ \ \ \ \ \
| | | | | | | | | o | | | | openssh@9.5p1/zjwxy3z
| |_|_|_|_|_|_|_|/| | | | |
|/| |_|_|_|_|_|_|/| | | | |
| |/| | |_|_|_|_|/| | | | |
| | | |/| | | | | | | | | |
| | | | | | | | | |\ \ \ \ \
| | | | | | | | | | |\ \ \ \ \
| | | | | | | | | | | |\ \ \ \ \
| | | | | | | | | | o | | | | | | libxcrypt@4.4.35/hezcx7g
| | | | |_|_|_|_|_|/| | | | | | |
| | | |/| | | | | |/ / / / / / /
| | | | | | | | |/| | | | | | |
| | | | | | | | | | o | | | | | libedit@3.1-20210216/s4kq4wo
| | | | |_|_|_|_|_|/| | | | | |
| | | |/| | | | |_|/| | | | | |
| | | | | | | |/| |/ / / / / /
| | | | | | | | | | o | | | | krb5@1.20.1/tjiqlym
| | |_|_|_|_|_|_|_|/| | | | |
| |/| | |_|_|_|_|_|/| | | | |
| | | |/| | | | | | | | | | |
| | | | | | | | | | |\ \ \ \ \
| | | | | | | | | | | |\ \ \ \ \
| | | | | | | | | | | | |\ \ \ \ \
| | | | | | | | | | | o | | | | | | findutils@4.9.0/cws3eft
| | | | |_|_|_|_|_|_|/ / / / / / /
| | | |/| | | | | | | | | | | | |
| | | | | | | | | | | | o | | | | bison@3.8.2/lza42n2
| | | | |_|_|_|_|_|_|_|/| | | | |
| | | |/| | | | | |_|_|/| | | | |
| | | | | | | | |/| | |/| | | | |
| | | | | | | | | | |/|/| | | | |
| | | | | | | | | | o | | | | | | gettext@0.22.3/y26lmlo
| | | | |_|_|_|_|_|/| | | | | | |
| | | |/| | | | | |/| | | | | | |
| | | | | | | | | | |\ \ \ \ \ \ \
| | | | | | | | | | | |\ \ \ \ \ \ \
| | | | | | | | | | | | |\ \ \ \ \ \ \
| | | | | | | | | | | | | |\ \ \ \ \ \ \
| | | | | | | | | | | o | | | | | | | | | tar@1.34/vdb3ozo
| | | | |_|_|_|_|_|_|/| | | | | | | | | |
| | | |/| | | | | | |/| | | | | | | | | |
| | | | | | | | | | | |\ \ \ \ \ \ \ \ \ \
| | | | | | | | | | | | |\ \ \ \ \ \ \ \ \ \
| | | | | | | | | | | | | |\ \ \ \ \ \ \ \ \ \
| | | | | | | | | | | | | | |_|/ / / / / / / /
| | | | | | | | | | | | | |/| | | | | | | | |
| | | | | | | | | | | | | | |/ / / / / / / /
| | | | | | | | | | | o | | | | | | | | | | zstd@1.5.5/jkznmrm
| | | | |_|_|_|_|_|_|/ / / / / / / / / / /
| | | |/| | | | | | | | | | | | | | | | |
| | | | | | | | | | | o | | | | | | | | | pigz@2.7/catlxmo
| |_|_|_|_|_|_|_|_|_|/| | | | | | | | | |
|/| | | |_|_|_|_|_|_|/ / / / / / / / / /
| | | |/| | | | | | | | | | | | | | | |
| | | | | | | | | | | | | | | | o | | | numactl@2.0.14/mbwdizy
| | | |_|_|_|_|_|_|_|_|_|_|_|_|/| | | |
| | |/| |_|_|_|_|_|_|_|_|_|_|_|/| | | |
| | | |/| |_|_|_|_|_|_|_|_|_|_|/| | | |
| | | | |/| |_|_|_|_|_|_|_|_|_|/| | | |
| | | | | |/| | | | | | | | | |/ / / /
| | | | o | | | | | | | | | | | | | | automake@1.16.5/d3cncgl
| | | |/| | | | | | | | | | | | | | |
| | | | |\| | | | | | | | | | | | | |
| | | | | |_|_|/ / / / / / / / / / /
| | | | |/| | | | | | | | | | | | |
| | | | | o | | | | | | | | | | | | autoconf@2.69/mnfnoa5
| | | | |/| | | | | | | | | | | | |
| | | |/|/| | | | | | | | | | | | |
| | | | | | |_|_|_|_|_|_|_|/ / / /
| | | | | |/| | | | | | | | | | |
| | | | | | | | | | | | | | o | | openblas@0.3.24/ksqcyto
| | | | |_|_|_|_|_|_|_|_|_|/| | |
| | | |/| |_|_|_|_|_|_|_|_|/ / /
| | | | |/| | | | | | | | | | |
| | | | | | | | | | | | | | o | kokkos@4.1.00/66qtu3e
| | | | |_|_|_|_|_|_|_|_|_|/| |
| | | |/| | | | | | | | | | | |
| | | | | | | | | | | | | | |/
| | | | | | o | | | | | | | | hwloc@2.9.1/dyrsjed
| | | | |_|/| | | | | | | | |
| | | |/| | | | | | | | | | |
| | | | | | |\| | | | | | | |
| | | | | | |\ \ \ \ \ \ \ \ \
| | | | | | | |_|/ / / / / / /
| | | | | | |/| | | | | | | |
| | | | | | | |\ \ \ \ \ \ \ \
| | | | | | | | |_|_|_|_|/ / /
| | | | | | | |/| | | | | | |
| | | | | | | o | | | | | | | libxml2@2.10.3/67qoxbv
| |_|_|_|_|_|/| | | | | | | |
|/| | | |_|_|/| | | | | | | |
| | | |/| | | | | | | | | | |
| | | | | | | |\ \ \ \ \ \ \ \
| | | | | | | | |_|_|/ / / / /
| | | | | | | |/| | | | | | |
| | | | | | | | |\ \ \ \ \ \ \
| | | | | | | | | |_|/ / / / /
| | | | | | | | |/| | | | | |
| | | | | | | | | |/ / / / /
| | | | | | | o | | | | | | xz@5.4.1/axxqoeq
| | | | |_|_|/ / / / / / /
| | | |/| | | | | | | | |
| | | | | | | | | o | | | libpciaccess@0.17/af4bqq6
| | | |_|_|_|_|_|/| | | |
| | |/| |_|_|_|_|/| | | |
| | | |/| | | | |/| | | |
| | | | | | | |/| | | | |
| | | | | | | | | o | | | util-macros@1.19.3/b7j7735
| | | | |_|_|_|_|/ / / /
| | | |/| | | | | | | |
| | o | | | | | | | | | libtool@2.4.7/rgag55h
| | |\| | | | | | | | |
| | | |_|/ / / / / / /
| | |/| | | | | | | |
| | o | | | | | | | | m4@1.4.19/jnv5nut
| | |\| | | | | | | |
| | |\ \ \ \ \ \ \ \ \
| | | | |_|_|_|_|_|/ /
| | | |/| | | | | | |
| | o | | | | | | | | libsigsegv@2.14/zuopqri
| | | |/ / / / / / /
| | |/| | | | | | |
| | | | | | | | | o cmake@3.27.7/kd6xihn
| |_|_|_|_|_|_|_|/|
|/| | | | | |_|_|/|
| | | | | |/| | | |
| | | | | | | | | o curl@8.4.0/ijsmc3j
| |_|_|_|_|_|_|_|/|
|/| |_|_|_|_|_|_|/|
| |/| |_|_|_|_|_|/|
| | |/| | | | |_|/|
| | | | | | |/| | |
| o | | | | | | | | openssl@3.1.3/35j7wvr
|/| | | | | | | | |
| |\ \ \ \ \ \ \ \ \
| | |_|_|/ / / / / /
| |/| | | | | | | |
| o | | | | | | | | perl@5.38.0/dg34i2a
|/| | | | | | | | |
| |\ \ \ \ \ \ \ \ \
| | |\ \ \ \ \ \ \ \ \
| | | |_|_|_|_|_|_|/ /
| | |/| | | | | | | |
o | | | | | | | | | | zlib-ng@2.1.4/5xcetrv
| |_|_|_|/ / / / / /
|/| | | | | | | | |
| o | | | | | | | | gdbm@1.23/m626hzw
|/| | | | | | | | |
| o | | | | | | | | readline@8.2/xxgqlmj
|/| | | | | | | | |
| | |_|_|_|/ / / /
| |/| | | | | | |
| o | | | | | | | ncurses@6.4/qqlh6as
|/| | | | | | | |
| | |_|_|_|/ / /
| |/| | | | | |
| | o | | | | | bzip2@1.0.8/4oz3kpf
| | | |_|/ / /
| | |/| | | |
| | o | | | | diffutils@3.9/ueheij3
| |/| | | | |
|/| | | | | |
| | | |_|/ /
| | |/| | |
| | o | | | libiconv@1.17/ivn4eq4
| |/ / / /
|/| | | |
| | o | | berkeley-db@18.1.40/ku7makq
| |/ / /
|/| | |
| | o | ca-certificates-mozilla@2023-05-30/ct4al4u
| | /
| | o nghttp2@1.57.0/my64owh
| |/|
|/|/
| o pkgconf@1.9.5/zjgtpdo
|/
o gmake@4.4.1/znvoani
You can control how the output is displayed with a number of options.
The ASCII output from spack graph can be difficult to parse for
complicated packages. The output can be changed to the Graphviz
.dot format using the --dot flag.
$ spack graph --dot trilinos | dot -Tpdf > trilinos_graph.pdf
Uninstalling Packages
Earlier we installed many configurations each of zlib-ng and Tcl. Now we will go through and uninstall some of those packages that we didn’t really need.
$ spack find -d tcl
-- linux-ubuntu22.04-x86_64_v3 / clang@14.0.0 -------------------
tcl@8.6.12
gmake@4.4.1
zlib-ng@2.0.7
-- linux-ubuntu22.04-x86_64_v3 / gcc@11.4.0 ---------------------
tcl@8.6.12
gmake@4.4.1
zlib-ng@2.0.7
tcl@8.6.12
gmake@4.4.1
zlib-ng@2.1.4
==> 3 installed packages
$ spack find zlib-ng
-- linux-ubuntu22.04-x86_64_v3 / clang@14.0.0 -------------------
zlib-ng@2.0.7 zlib-ng@2.1.4
-- linux-ubuntu22.04-x86_64_v3 / gcc@10.5.0 ---------------------
zlib-ng@2.1.4
-- linux-ubuntu22.04-x86_64_v3 / gcc@11.4.0 ---------------------
zlib-ng@2.0.7 zlib-ng@2.0.7 zlib-ng@2.1.4
==> 6 installed packages
We can uninstall packages by spec using the same syntax as install.
$ spack uninstall -y zlib-ng %gcc@10
==> Successfully uninstalled zlib-ng@2.1.4%gcc@10.5.0+compat+opt build_system=autotools arch=linux-ubuntu22.04-x86_64_v3/tm2or5e
$ spack find -lf zlib-ng
-- linux-ubuntu22.04-x86_64_v3 / clang@14.0.0 -------------------
amkpmim zlib-ng@2.0.7%clang hywknao zlib-ng@2.1.4%clang
-- linux-ubuntu22.04-x86_64_v3 / gcc@11.4.0 ---------------------
ffnsgi6 zlib-ng@2.0.7%gcc 5xcetrv zlib-ng@2.1.4%gcc
npuw4up zlib-ng@2.0.7%gcc cflags="-O3"
==> 5 installed packages
We can also uninstall packages by referring only to their hash.
We can use either -f (force) or -R (remove dependents as well) to
remove packages that are required by another installed package.
$ spack uninstall zlib-ng/amk
==> Refusing to uninstall the following specs
-- linux-ubuntu22.04-x86_64_v3 / clang@14.0.0 -------------------
amkpmim zlib-ng@2.0.7
==> The following dependents are still installed:
-- linux-ubuntu22.04-x86_64_v3 / clang@14.0.0 -------------------
keocaqa tcl@8.6.12
==> Error: There are still dependents.
use `spack uninstall --dependents` to remove dependents too
use `spack uninstall --force` to override
$ spack uninstall -y -R zlib-ng/amk
==> Successfully uninstalled tcl@8.6.12%clang@14.0.0 build_system=autotools arch=linux-ubuntu22.04-x86_64_v3/keocaqa
==> Successfully uninstalled zlib-ng@2.0.7%clang@14.0.0+compat+opt build_system=autotools arch=linux-ubuntu22.04-x86_64_v3/amkpmim
Spack will not uninstall packages that are not sufficiently
specified. The -a (all) flag can be used to uninstall multiple
packages at once.
$ spack uninstall trilinos
==> Error: trilinos matches multiple packages:
-- linux-ubuntu22.04-x86_64_v3 / gcc@11.4.0 ---------------------
46nzgyj trilinos@14.4.0 gnrf5ri trilinos@14.4.0
==> Error: You can either:
a) use a more specific spec, or
b) specify the spec by its hash (e.g. `spack uninstall /hash`), or
c) use `spack uninstall --all` to uninstall ALL matching specs.
$ spack uninstall /46n
y
==> The following 1 packages will be uninstalled:
-- linux-ubuntu22.04-x86_64_v3 / gcc@11.4.0 ---------------------
46nzgyj trilinos@14.4.0
==> Do you want to proceed? [y/N] ==> Successfully uninstalled trilinos@14.4.0%gcc@11.4.0~adelus~adios2+amesos+amesos2+anasazi+aztec~basker+belos~boost~chaco~complex~cuda~cuda_rdc~debug~dtk+epetra+epetraext~epetraextbtf~epetraextexperimental~epetraextgraphreorderings~exodus+explicit_template_instantiation~float+fortran~gtest~hdf5~hypre+ifpack+ifpack2~intrepid~intrepid2~ipo~isorropia+kokkos~mesquite~minitensor+ml+mpi+muelu~mumps~nox~openmp~panzer~phalanx~piro~python~rocm~rocm_rdc~rol~rythmos+sacado~scorec~shards+shared~shylu~stk~stokhos~stratimikos~strumpack~suite-sparse~superlu~superlu-dist~teko~tempus~test~thyra+tpetra~trilinoscouplings~wrapper~x11~zoltan~zoltan2 build_system=cmake build_type=Release cxxstd=17 generator=make gotype=long_long arch=linux-ubuntu22.04-x86_64_v3/46nzgyj
Advanced spack find Usage
We will go over some additional uses for the spack find command not
already covered in the Installing Spack and
Uninstalling Packages sections.
The spack find command can accept what we call “anonymous specs.”
These are expressions in spec syntax that do not contain a package
name. For example, spack find ^mpich will return every installed
package that depends on MPICH, and spack find cflags="-O3" will
return every package which was built with cflags="-O3".
$ spack find ^mpich
-- linux-ubuntu22.04-x86_64_v3 / gcc@11.4.0 ---------------------
hdf5@1.14.3 trilinos@14.4.0
==> 2 installed packages
$ spack find cflags=-O3
-- linux-ubuntu22.04-x86_64_v3 / gcc@11.4.0 ---------------------
zlib-ng@2.0.7
==> 1 installed package
The find command can also show which packages were installed
explicitly (rather than pulled in as a dependency) using the lowercase
-x flag. The uppercase -X flag shows implicit installs only.
The find command can also show the path to which a Spack package
was installed using the -p flag.
$ spack find -px
-- linux-ubuntu22.04-x86_64_v3 / clang@14.0.0 -------------------
zlib-ng@2.1.4 /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/clang-14.0.0/zlib-ng-2.1.4-hywknaoywohnvaldqch2ly74svzezfrw
-- linux-ubuntu22.04-x86_64_v3 / gcc@11.4.0 ---------------------
gmake@4.4.1 /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/gmake-4.4.1-znvoaniggvauzxv4yobchqt4g7tyjuc7
hdf5@1.14.3 /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/hdf5-1.14.3-scxtjf3337ivhhuegqzfrpzvls7c5qbb
hdf5@1.14.3 /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/hdf5-1.14.3-7eeohwaegvx2xa3ybcdsont2qmllii2i
hdf5@1.14.3 /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/hdf5-1.14.3-54ik6mvay2cwhoznzuhkud57dqeat7mj
tcl@8.6.12 /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/tcl-8.6.12-qfb3pvmra4r2pbhuklpbtk77wdwzfpxj
tcl@8.6.12 /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/tcl-8.6.12-tt2hv6rwgikh7fzzrbkveukdhs2jmioe
trilinos@14.4.0 /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/trilinos-14.4.0-gnrf5rihwn3bvmc2sdmgpdrqbgdp2xwt
zlib-ng@2.0.7 /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/zlib-ng-2.0.7-ffnsgi66pitfl3r6drsojucl66osakje
zlib-ng@2.0.7 /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/zlib-ng-2.0.7-npuw4upl6iiyuihnlv4qxnw4fjatcg4h
==> 10 installed packages
Customizing Compilers
Spack manages a list of available compilers on the system, detected
automatically from the user’s PATH variable. The spack
compilers command is an alias for the command spack compiler list.
$ spack compilers
==> Available compilers
-- clang ubuntu22.04-x86_64 -------------------------------------
clang@14.0.0
-- gcc ubuntu22.04-x86_64 ---------------------------------------
gcc@11.4.0 gcc@10.5.0
The compilers are maintained in a YAML file. Later in the tutorial you will learn how to configure compilers by hand for special cases. Spack also has tools to add compilers, and compilers built with Spack can be added to the configuration.
$ spack install gcc@12
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/libiconv-1.17-ivn4eq42mmvco5l3drcxjzbmpto5nfi2
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/gmake-4.4.1-znvoaniggvauzxv4yobchqt4g7tyjuc7
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/bzip2-1.0.8-4oz3kpfibmlvfizzivudj7pnzm2w7ce7
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/xz-5.4.1-axxqoeqv4lckdxrkvdp6f376ndmade4c
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/berkeley-db-18.1.40-ku7makqmto7yrue2y3duu2phqtnvqd26
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/libtool-2.4.7-rgag55hxbjmkoqpx4gnr2golz2zfyvnt
==> Installing autoconf-archive-2023.02.20-4wbogd6h4jop5ktv44amjnwgadxs4x7s [7/28]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-autoconf-archive-2023.02.20-4wbogd6h4jop5ktv44amjnwgadxs4x7s.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/autoconf-archive-2023.02.20/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-autoconf-archive-2023.02.20-4wbogd6h4jop5ktv44amjnwgadxs4x7s.spack
==> Extracting autoconf-archive-2023.02.20-4wbogd6h4jop5ktv44amjnwgadxs4x7s from binary cache
==> autoconf-archive: Successfully installed autoconf-archive-2023.02.20-4wbogd6h4jop5ktv44amjnwgadxs4x7s
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[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/autoconf-archive-2023.02.20-4wbogd6h4jop5ktv44amjnwgadxs4x7s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/zlib-ng-2.1.4-5xcetrvs3fzd7k27dw5duyxitnsy4uvh
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/diffutils-3.9-ueheij3wbhepmelnkti3jsglzzknb4en
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/libsigsegv-2.14-zuopqrik4y7vhqq2isjnr6mbixyks4uk
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/ncurses-6.4-qqlh6asufg6vhjnkbhwxl3jmocyolykt
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/zstd-1.5.5-jkznmrmqdgtpzvs42qxljrjs6m6f6aho
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/libxml2-2.10.3-67qoxbv3pyyep745wytvlgnnosn6pwnr
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/pigz-2.7-catlxmodt7sirns2di5pod576omq32hk
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/m4-1.4.19-jnv5nut43juhm7esjn3tvxas6m67zbx4
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/readline-8.2-xxgqlmjyegrwwuq2pq4zaq7y6qojp3mz
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/tar-1.34-vdb3ozocdu73c4gl45gnzcjgscfye6mg
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/gdbm-1.23-m626hzwxamau2a4cbu2hptq477qnufc4
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/gettext-0.22.3-y26lmloj3u6romzd6j3xdfiib7gnkbga
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/perl-5.38.0-dg34i2ae7omo77k6ntqkb6zi76gmeava
==> Installing texinfo-7.0.3-km6pqxpokzzltdfmos6imx5ema426pbo [21/28]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-texinfo-7.0.3-km6pqxpokzzltdfmos6imx5ema426pbo.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/texinfo-7.0.3/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-texinfo-7.0.3-km6pqxpokzzltdfmos6imx5ema426pbo.spack
==> Extracting texinfo-7.0.3-km6pqxpokzzltdfmos6imx5ema426pbo from binary cache
==> texinfo: Successfully installed texinfo-7.0.3-km6pqxpokzzltdfmos6imx5ema426pbo
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[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/texinfo-7.0.3-km6pqxpokzzltdfmos6imx5ema426pbo
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/autoconf-2.69-mnfnoa5qnshe7gdq7gnlkwowqxyrymia
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/automake-1.16.5-d3cncglfvi2mpx7ytpfqnleyc233qcej
==> Installing gmp-6.2.1-2fyiqrpectdqmzxrocihc3d6liwcog7q [24/28]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-gmp-6.2.1-2fyiqrpectdqmzxrocihc3d6liwcog7q.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/gmp-6.2.1/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-gmp-6.2.1-2fyiqrpectdqmzxrocihc3d6liwcog7q.spack
==> Extracting gmp-6.2.1-2fyiqrpectdqmzxrocihc3d6liwcog7q from binary cache
==> gmp: Successfully installed gmp-6.2.1-2fyiqrpectdqmzxrocihc3d6liwcog7q
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[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/gmp-6.2.1-2fyiqrpectdqmzxrocihc3d6liwcog7q
==> Installing mpfr-4.2.0-qpadvjwbtznek4qmw4juuzibprsy6hq2 [25/28]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-mpfr-4.2.0-qpadvjwbtznek4qmw4juuzibprsy6hq2.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/mpfr-4.2.0/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-mpfr-4.2.0-qpadvjwbtznek4qmw4juuzibprsy6hq2.spack
==> Extracting mpfr-4.2.0-qpadvjwbtznek4qmw4juuzibprsy6hq2 from binary cache
==> mpfr: Successfully installed mpfr-4.2.0-qpadvjwbtznek4qmw4juuzibprsy6hq2
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[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/mpfr-4.2.0-qpadvjwbtznek4qmw4juuzibprsy6hq2
==> Installing mpc-1.3.1-jueol5ka7fjf36klccht5uhmdlc5hive [26/28]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-mpc-1.3.1-jueol5ka7fjf36klccht5uhmdlc5hive.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/mpc-1.3.1/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-mpc-1.3.1-jueol5ka7fjf36klccht5uhmdlc5hive.spack
==> Extracting mpc-1.3.1-jueol5ka7fjf36klccht5uhmdlc5hive from binary cache
==> mpc: Successfully installed mpc-1.3.1-jueol5ka7fjf36klccht5uhmdlc5hive
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[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/mpc-1.3.1-jueol5ka7fjf36klccht5uhmdlc5hive
==> Installing gawk-5.2.2-t4xydm4ppyli6uphcmirv4kov6qhtamw [27/28]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-gawk-5.2.2-t4xydm4ppyli6uphcmirv4kov6qhtamw.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/gawk-5.2.2/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-gawk-5.2.2-t4xydm4ppyli6uphcmirv4kov6qhtamw.spack
==> Extracting gawk-5.2.2-t4xydm4ppyli6uphcmirv4kov6qhtamw from binary cache
==> gawk: Successfully installed gawk-5.2.2-t4xydm4ppyli6uphcmirv4kov6qhtamw
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[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/gawk-5.2.2-t4xydm4ppyli6uphcmirv4kov6qhtamw
==> Installing gcc-12.3.0-chmemdiqoycjlxz2myvdxqzt5don54uw [28/28]
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-gcc-12.3.0-chmemdiqoycjlxz2myvdxqzt5don54uw.spec.json.sig
==> Fetching file:///mirror/build_cache/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/gcc-12.3.0/linux-ubuntu22.04-x86_64_v3-gcc-11.4.0-gcc-12.3.0-chmemdiqoycjlxz2myvdxqzt5don54uw.spack
==> Extracting gcc-12.3.0-chmemdiqoycjlxz2myvdxqzt5don54uw from binary cache
==> gcc: Successfully installed gcc-12.3.0-chmemdiqoycjlxz2myvdxqzt5don54uw
Search: 0.00s. Fetch: 0.69s. Install: 12.14s. Extract: 10.85s. Relocate: 1.28s. Total: 12.84s
[+] /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/gcc-12.3.0-chmemdiqoycjlxz2myvdxqzt5don54uw
$ spack find -p gcc
-- linux-ubuntu22.04-x86_64_v3 / gcc@11.4.0 ---------------------
gcc@12.3.0 /home/spack/spack/opt/spack/linux-ubuntu22.04-x86_64_v3/gcc-11.4.0/gcc-12.3.0-chmemdiqoycjlxz2myvdxqzt5don54uw
==> 1 installed package
We can add GCC to Spack as an available compiler using the spack
compiler add command. This will allow future packages to build with
gcc@12.3.0. To avoid having to copy and paste GCC’s path, we can use
spack location -i to get the installation prefix.
$ spack compiler add "$(spack location -i gcc@12)"
==> Added 1 new compiler to /home/spack/.spack/linux/compilers.yaml
gcc@12.3.0
==> Compilers are defined in the following files:
/home/spack/.spack/linux/compilers.yaml
We can also remove compilers from our configuration using spack compiler remove <compiler_spec>
$ spack compiler remove gcc@12
==> gcc@12.3.0 has been removed